Theropithecus gelada (gelada): 112605807
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Entry
112605807 CDS
T08041
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112605807 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tge03021
]
112605807 (PCF11)
03019 Messenger RNA biogenesis [BR:
tge03019
]
112605807 (PCF11)
Transcription machinery [BR:
tge03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112605807 (PCF11)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
112605807 (PCF11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
112605807
NCBI-ProteinID:
XP_025211486
Ensembl:
ENSTGEG00000003315
LinkDB
All DBs
Position
14:75213958..75243141
Genome browser
AA seq
1686 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDVKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELEQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHMKSSEHRVAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSISPTSTPKAGKIRQSGVKQSHMEEFTPPSRE
DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG
WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMI
FEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQ
PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQTSRFDIPLGLQGTRFDNHPSQRLESVSF
NQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHY
FDEKNLQSSQFGNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQ
NPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVSEVAAQPPPEEEEDQ
NEDQDVPDLTNFTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQN
RTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEF
QSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFD
CTPSPSKTPAENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKTEN
DTVESV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaagccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactaggaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacgtctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaggagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacacaa
gaacaactaataaggcagcagttactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggaaacatccaatttaggtcctggatctgcaccatctaaattacatgtttcacag
attccccctatggcagttaaagctcctcatcaggttcctgtgcaatctgagaaaagccgt
ccaggaccatccttacaaattcaggatgtgaaaggaactaaccgggatcctcgtctgaac
aggataagccaacattctcatggaaaagatcaaagtcacaggaaagaatttctaatgaac
acattaaaccagtctgatattaagacaagtaaaactataccctctgaaaaactaaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaacaatta
gattctaaatcgaaatcgaaatcgaaatcaccatcacctttgaaaaacaaattgtctcac
acaaaagacttgaaaaatcaagaatcagaaagtatgaggttgtctgatatgaacaagaga
gacccaagattaaaaaaacatcttcaggataagactgatggcaaagacgatgatgtgaaa
gagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaagtcatccgaacac
agagtggctggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacaata
acagaagagtcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctaggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaaacgaaggcaaagaagtatatctccaacatcgacacctaaagctggaaag
attcgccaatctggagttaagcagtcacatatggaagagtttacaccaccttctagggaa
gacagaaatgctaagagaagtactaaacaggatattcgggatccaaggcgaatgaaaaag
actgaagaggagcggccacaagaaactacaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaactggcaaagttccaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacagcaggttgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagcactaaaggaattttatcgcctcgagccccaaagcagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagagatctccattcaatgat
cgttttccacttaagcgacctcgatatgaagattcagataaaccatttgtagatagccca
gcatcaagattcgccggcctggatacaaatcagcgacttacagctttagctgaagacaga
ccattatttgatggacctagtaggccatcagtagcaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctcgaattgatggacctcccacaccagcttctctt
cggtttgatgggtcaccaggacaaatggggggaggaggccctttgagatttgaagggcca
caaggtcagctaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagtgggg
acacctctgcggtttgagggcccaattggtcaagcaggaggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggtttacgatttgagggaccaggg
ggccagcctgtgggtggtctgaggtttgagggacatcgtggtcaacccgtgggtggtcta
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagcctgtaggtggacttagatttgaagggggtcatggtccatcaggggctgctattagg
tttgatggacctcatggtcagccaggaggtggaatcagatttgagggccctttgctacag
caaggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgagattt
gagggacaacataatcaacttggtggaaaccttaggtttgagggtccacatggccaacca
ggggttggtatcaggtttgaaggccctttagtccaacaaggaggtggaatgaggtttgag
ggtccttctgtaccaggaggtggcctgagaattgaagggcctctgggtcaaggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccttcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaaggactcctggtcag
ccaggccctcagaggtttgatggaccacctggacagcaggttcagcccagatttgatggt
gtacctcaaagatttgatggtccacaacatcagcagacatcaaggtttgatattcctctt
ggtcttcaaggcacaagatttgacaatcatccttcacaaaggcttgaatcagtatctttc
aatcagactggtccatataatgatccacctggcaatgcttttaatgccccatctcaagga
ctgcagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatgga
ccacatggccctggaaaccagagtttctctaatccacttaacagagcttctggacactat
tttgatgaaaaaaatcttcagagttctcaatttggaaactttggcaatatacctgctcca
atgacagtaggaaatattcaggcatctcaacaggttctgagtggtgttgctcagccagta
gcttttggtcaaggacaacagtttttaccagttcatccacaaaatcctggatttgttcag
aatccttcaggagcactccctaaggcgtatcctgataatcatctcagtcaagtggatgta
aatgaattgttttcaaaattgctaaaaacaggaattctcaaattgtcccaacctgattca
gctacaacacaagtaagtgaagtagctgctcagcctccccctgaagaggaggaagatcaa
aatgaagatcaagatgttccagatcttactaattttacagttgaagaattgaaacaacgt
tatgacagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgagg
tttacaacatcacagacagatgtttatgcggatcatttggactggcattatcggcaaaat
agaactgaaaaggatgttagcagaaaagtcactcatagacgttggtactacagtttaaca
gactggatagaatttgaggagatagctgatctggaagaacgggcaaagagccagtttttt
gaaaaggtgcatgaagaagttgtgctcaaaactcaagaggctgctaaagaaaaagagttc
caaagtgtacctgctggaccagctggagcagttgagagttgtgaaatctgtcaagaacaa
tttgaacaatactgggatgaagaggaggaggaatggcatttgaaaaatgctattagagta
gatggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgat
tgtacaccatctcccagcaagacaccagctgaaaaccccttgaatattatgttgaacatt
gtcaaaaacgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacgaattgat
acaccaccagcttgtacagaggaaagcatagcaacaccctctgaaattaaaacagaaaat
gacacagttgagtcagtttaa
DBGET
integrated database retrieval system
