Theropithecus gelada (gelada): 112608886
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Entry
112608886 CDS
T08041
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112608886 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tge03041
]
112608886 (DDX42)
Enzymes [BR:
tge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112608886 (DDX42)
Spliceosome [BR:
tge03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
112608886 (DDX42)
Complex B
112608886 (DDX42)
Complex C
U2 SnRNP specific factors
112608886 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
112608886
NCBI-ProteinID:
XP_025216734
Ensembl:
ENSTGEG00000023201
UniProt:
A0A8D2G113
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All DBs
Position
16:37534139..37581285
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AA seq
937 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGMVQEEEEDN
LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVASATKGIPGFGNTGNISGAPVTYP
SAGAQGVNNTASGNNSREGTGGGNGKRERYENRGSSRHSHGETGNRHSDSPRHGDGGRHG
DGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEACNRESKMEPKME
PKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggtcctggcactaagcgaggatttggctttggaggtttcgcc
atcagtgctgggaaaaaggaggaacccaaactcccacagcagtcccacagtgcctttggg
gcaaccagctcttcttctggatttggaaagtcagctccaccacagcttccttctttctac
aaaattggatctaagcgggccaactttgatgaagaaaatgcctattttgaagatgaggaa
gaagactctagcaatgttgatttaccttacattcctgctgaaaactcaccaactcgccag
caattccattccaagccagtagattctgacagtgatgatgatcccttggaggcattcatg
gctgaagtggaggatcaggcagctagagacatgaagaggcttgaagaaaaggacaaagaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgatacatggcagaaaacccaactgctggtatggttcaggaggaagaggaagacaat
ctagaatatgatagtgacggaaatccaattgcacctaccaaaaaaataattgatcctctt
ccccccattgatcattcagagattgactatccaccatttgaaaaaaacttttacaatgag
catgaagagataaccaacctcactccacagcagttaatagatctccgacataagctcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagctttgctcattttgggttt
gacgaacaacttatgcaccagattcggaaatctgaatacacacagcccactccaatacag
tgtcagggtgtgcctgtggcattgagtggtagagacatgattggtattgccaaaacaggt
agtgggaaaactgcagccttcatatggcccatgttgattcatataatggaccagaaggag
ttggaaccaggtgatggaccaatagcagtgattgtgtgtcctaccagggagctttgccag
cagatccatgcagaatgtaagcggtttggaaaagcatataatcttcgatcagtggccgta
tatggaggagggagtatgtgggagcaggccaaggcccttcaggagggggcagagattgtt
gtgtgtaccccaggtcgactgattgatcatgtgaaaaagaaagctaccaatcttcaaaga
gtctcttaccttgtgtttgatgaagcagatcgaatgtttgacatgggatttgagtaccaa
gttcgatccatagcaagtcatgttcgtcctgacaggcagactctcttatttagtgcaact
tttcggaaaaagattgaaaagttggccagagacatcctgatcgaccctattcgagtggtg
cagggagatattggagaggcaaatgaagatgtgacacagattgtggagattctccattct
ggacctagtaaatggaactggcttacccggcgtctggtagagtttacctcttcagggagt
gtcctcctctttgttactaaaaaagccaatgctgaagagctagcgaataaccttaaacag
gagggtcataatcttgggctgctccatggggatatggatcagagtgagagaaacaaggtc
atttcagactttaagaaaaaggacatcccagtcctggtggccacagatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggcacgagacattgat
actcacacgcataggattggccgcacgggaagagcgggtgagaaaggtgtggcctatacc
ctgctcactcccaaggacagcaattttgctggtgacctggtccggaacttagaaggagcc
aatcaacacgtttctaaggaactcctagatctggcaatgcagaatgcctggtttcggaaa
tctcgattcaaaggagggaaaggaaaaaagctgaacattggtggaggaggcctaggctat
agggagcggcctggcctgggctctgagaacatggaccgaggaaataacaatgtaatgagc
aattatgaggcctacaagccttccacaggagctatgggagatcgactaacggcaatgaaa
gcagctttccagtcacagtacaagagtcactttgttgcagccagtttaagtaatcagaag
gctggaagctctgctgctggggcaagtgggtggactagcgcagggagcttgaattctgtt
ccaactaactcagcacaacagggccataacagtcctgacagccctgttgccagtgccacc
aagggcattccaggctttggcaatactggcaacatcagtggtgcccctgtgacctaccca
tctgctggagcccagggagtcaacaacacagcttcagggaataacagccgagaagggact
gggggcggcaacgggaaaagagagagatatgagaaccggggcagcagccgtcacagtcac
ggagagactggcaatcggcatagcgatagcccacgtcatggagatggtggtcgccatgga
gatggataccgccacccagaaagcagcagccgtcacactgatggccatcggcatggagag
aacagacatggaggaagcgcaggccggcatggggagaaccggggtgcaaatgacggtcgg
aatggggaaagcaggaaagaagcttgtaatcgtgagagcaagatggagcccaagatggaa
cccaaagtggacagcagcaagatggacaaggtggacagcaagacagataagacagctgat
ggctttgctgtcccagagccgcctaaacgcaagaaaagtcgatgggacagttag
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