Theropithecus gelada (gelada): 112609062
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Entry
112609062 CDS
T08041
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112609062 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tge03400
]
112609062 (LIG3)
Enzymes [BR:
tge01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112609062 (LIG3)
DNA repair and recombination proteins [BR:
tge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
112609062 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
112609062
NCBI-ProteinID:
XP_025217193
Ensembl:
ENSTGEG00000015228
LinkDB
All DBs
Position
16:8981410..9004758
Genome browser
AA seq
1042 aa
AA seq
DB search
MDYIRGWPLENWKPISLFISFFFLWPPTLSCSYMSLAFKIPFPQTLRALSRKELYLFREH
HRPDVRQFSQWSETDLLHGHPVFLRRKPVLSFQGSHLRSRATCLVFLPGLHVGLCSGPCE
MAEQRFCVDYAKRGTAGCKKCKEKIVKGICRIGKVVPNPFSESGGDMKEWYHIKCMFEKL
ERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLSSKAASTPKKKAVVQAKLTTTGQ
VTSPVKSASFVTNNNSRKFSGFSAKPNNSGEAPSSPTPKRSLSSSKCDPKHKDCLLREFR
KLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGDVYLTVKLLLPGVVKTVYNLNDKQIV
KLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLRLSRL
TKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNL
QDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMFSEI
KYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNK
TGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNR
IMFSEMKRVTKASDLADMITRVIREGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMA
DTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDM
VKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRC
TRIRDDKDWKSATNLPQLKELYQLSKEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSR
KAPSKPSASTKKAEGKLSNSNSKGGNMLTAKPSAVKVGEKLAMKSSPVKVGEKRKAADET
LCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPA
AQQVSPEWIWACIRKRRLVAPC
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggattatataagaggctggcctttggaaaattggaagcctatctccttgtttatatct
tttttttttctttggcctcctaccctttcatgcagctatatgtctttggctttcaagatc
ccctttccacaaaccctccgtgcactcagccgaaaagaactgtacctattccgagaacat
cacaggcctgatgtaagacaattcagccagtggtcagaaacagatctgcttcatggacac
cccgtcttcctgagaagaaagcctgttctgtcattccagggaagccatctaagatcacgt
gccacctgccttgttttcttgccagggttgcatgtgggactctgcagtggcccctgtgag
atggctgagcaacggttctgtgtggactatgccaagcgtggcacagctggctgcaaaaaa
tgcaaggaaaagattgtgaagggcatatgccgaattggcaaagtggtgcccaatcccttc
tcagagtctgggggtgatatgaaagagtggtaccacattaaatgcatgtttgagaaacta
gagcgggcccgggccaccacaaaaaaaatcgaggacctcacagagctggaaggctgggaa
gagctggaagataatgagaaggaacagataacccagcacattgcagatctgtcttctaag
gcagcaagtacaccaaagaagaaagctgttgtccaggctaagttgacaaccactggccag
gtgacttctccagtgaaaagcgcctcatttgtcaccaataacaattcccggaaattttct
ggcttttcagccaagcccaacaactctggggaagccccctcaagccccacccctaagaga
agtctgtcttcaagcaaatgtgaccccaagcataaggactgtctgctacgggagtttcga
aagttatgcgccatggtggccgataatcctagctacaacacgaagacccagatcatccag
gacttcctgcggaaaggctcagcaggagatggtttccacggtgatgtgtacctaacagtg
aagctgctgctgccaggagtcgttaagactgtttacaacttgaatgataagcagattgtg
aagcttttcagtcgcatttttaactgcaacccagatgatatggcacgggacctagagcag
ggtgacgtgtcagagacaatcagagtcttctttgagcagagcaagtctttccccccagct
gccaagagcctccttaccatccaggaggtggatgagttccttctgcggctgtccaggctc
accaaggaggatgagcagcaacaggccctgcaggacattgcctccaggtgtacagccaat
gaccttaaatgcatcatcaggttgatcaaacatgatctgaagatgaactcgggtgcaaaa
catgtgttagacgcccttgaccccaatgcctatgaagccttcaaagcctcgcgcaacctg
caggatgtggtggaacgggtccttcacaatgcgcaggaggtggagaaggagccgggccag
agacgagctctgagcgtccaggcctcgctgatgacacccgtgcagcccatgctggcggag
gcctgcaagtccattgagtacgcaatgaagaaatgtcccaatggcatgttctctgagatc
aagtacgatggagagcgagtccaagtgcataagaatggagaccacttcagctacttcagc
cgcagtctcaagcccgtcctgcctcacaaggtagcccactttaaggactacatcccccag
gcttttcctgggggacacagcatgatcttggattctgaggtgcttctgattgacaacaag
acaggcaaaccactgccctttgggactctgggagtgcacaagaaagcagccttccaggat
gctaatgtctgcctgtttgtttttgattgtatctactttaatgatgtcagcttgatggac
aggcctctgtgtgagcggcggaagtttcttcatgacaacatggttgaaattccaaaccgg
atcatgttctcagaaatgaagcgagtcacaaaagcttcggacttggctgacatgataacc
cgggtgatccgggagggattggaggggctggtgctgaaggatgtgaagggtacatatgag
cctgggaagcggcactggctgaaagtgaagaaggactatttgaatgagggggccatggcc
gacacagctgacctggtggtccttggggccttctatgggcaagggagcaaaggcggcatg
atgtcaatcttcctcatgggctgctacgaccctggcagccagaagtggtgcacagtcacc
aagtgtgcaggaggccatgatgacgccacgcttgcccgcctgcagaatgaactagacatg
gtgaagatcagcaaggaccccagcaaaatacctagctggctgaaagtcaacaagatctac
tatcctgacttcatcgtcccagacccaaagaaagctgccgtgtgggagatcacaggggct
gaattctccaaatcggaggctcacacagctgatgggatctccatccgattccctcgctgc
acccgaatccgagatgataaggactggaaatctgccactaaccttccccaactcaaggaa
ctgtaccagttgtccaaggagaaggcagacttcactgtagtggctggagatgaggggagc
tccactacagggggtagcagtgaagagaataagggtccctcagggtctgctgtgtcccgc
aaggcccccagcaagccctctgccagtaccaagaaagcagaagggaagctgagtaactcc
aacagcaaaggcggcaacatgctgactgcaaagccttctgctgtgaaggtgggagagaag
ctggccatgaagtcttctccagtgaaagtaggggagaagcggaaagctgctgatgagacc
ctgtgccaaacaaaggtactgctggacatcttcactggagtgcggctttacttgccaccc
tccacaccagacttcagccgtctcagacgctactttgtggcattcgacggggacctggta
caggaatttgatatgacctcagccacgcacgtgctgggtagcagagacaagaaccctgcg
gcccagcaggtctccccagagtggatttgggcatgtatccggaaacggagactggtagct
ccctgctag
DBGET
integrated database retrieval system
