Theropithecus gelada (gelada): 112609162
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Entry
112609162 CDS
T08041
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04151
PI3K-Akt signaling pathway
tge04510
Focal adhesion
tge04512
ECM-receptor interaction
tge04611
Platelet activation
tge04820
Cytoskeleton in muscle cells
tge04926
Relaxin signaling pathway
tge04933
AGE-RAGE signaling pathway in diabetic complications
tge04974
Protein digestion and absorption
tge05146
Amoebiasis
tge05165
Human papillomavirus infection
tge05205
Proteoglycans in cancer
tge05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112609162 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112609162 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112609162 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112609162 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
112609162 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
112609162 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
112609162 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
112609162 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112609162 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
112609162 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
112609162 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112609162 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tge00536
]
112609162 (COL1A1)
Glycosaminoglycan binding proteins [BR:
tge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112609162 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
112609162
NCBI-ProteinID:
XP_025217417
Ensembl:
ENSTGEG00000028959
LinkDB
All DBs
Position
16:23525107..23542728
Genome browser
AA seq
1627 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEVISCPRLLS
LRRPCLLTVLPSLTWPLVSSSPIPQGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGP
PGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPG
EPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKG
HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG
ATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAG
NPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTG
AKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKG
PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG
PPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAG
PAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERG
VQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRG
DAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPAGPTGARGAPGDRGEPG
PPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARG
SAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPG
PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG
PSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGPKGDRGETGPAGPPG
APGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRG
IKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGTPGKDGLNGLPGPIGPPG
PRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVRD
RDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDA
IKVFCNMETGETCVYPTQPSVAQKNWYISKNPKDKRHVWFGESMTDGFQVLRVWRRGLRP
CRRGHPADLPAPDVHRGLPEHHLPLQEQRGLHGPADWQPQEGPAPPGLQRDRDPRRGQQS
LHLQRHCRWLHGEWPESSGRAPPLWPWAFWAGHSVLFPSLPRGNAPSHCLRPTPESHRSL
GQDSDRIQNHQDLPPAHHRCGPLGRWCPRPGIRLRRWPCLLPVNSLHPNLAPSHPTNFPP
NPETDKQPKLNPSKAKKWETISHGLWKIFFFLCIHLSNLVFIFDQPNMTKNQKCIQPYQK
KKKRINK
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc
tgcgtctgcgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac
tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagaa
tcacccaccgaccaagaaaccaccggcgtcgaggtaatctcctgccctcgacttttgtcc
ctccgccgcccgtgcctcctcacggtcctcccttctctaacctggcctcttgtttcttct
tccccaatcccacagggacccaagggagacactggcccccgaggcccaaggggacccgca
ggcccccctggccgagatggcatccctggacagcctggacttcccggaccccccggaccc
cccggacctcccggaccccctggcctcggaggaaacttcgctccccagttgtcttatggc
tatgatgagaaatcaaccggaggaatttccgtgcctggtcccatgggtccctctggtccc
cgtggtctccctggcccccctggtgcacctggtcctcaaggcttccaaggtccccctggt
gagcctggcgagcctggagcttcaggtcccatgggtccccgaggtccccctggcccccct
ggaaagaacggagatgatggggaagctggaaaacctggtcgtcctggtgagcgtgggcct
cctgggcctcagggtgctcgaggattgcccggaacagctggcctccctggaatgaaggga
cacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaag
ggtgagcctggcagccctggtgaaaatggagctcctggtcagatgggcccccgtggtctg
cctggtgagagaggtcgccctggagcccctggccctgctggtgctcgcggaaatgatggt
gctactggtgctgccggaccccctggtcctaccggccccgctggtcctcctggcttccct
ggtgctgttggtgctaagggcgaagctggcccccaaggtccccgaggctctgaaggtccc
cagggtgtgcgtggtgagcctggcccccctggccctgctggtgctgctggccctgctgga
aaccctggtgctgatggacagcctggcgctaaaggtgccaatggtgctcctggtattgct
ggtgctcctggcttccctggtgcccgaggcccctctggaccccagggccccggcggccct
cccggtcccaagggtaacagcggtgaacctggtgctcctggcagcaaaggagacactggt
gctaagggagaacccggccccgttggtgttcaaggacctcctggccctgctggagaggaa
ggaaagcgaggagctcgaggtgaacccggacccactggcctgcccggaccccctggcgag
cgtggtggacctggtagccgtggtttccctggtgcagatggtgttgctggtcccaagggt
cccgctggtgaacgtggttctcctggccctgctggccccaaaggatctcctggtgaagct
ggtcgtcccggtgaagctggtctgcctggtgccaagggtctgactggaagccctggcagc
cctggtcctgatggcaaaactggcccccctggtcccgccggtcaagatggtcgccccgga
cccccaggcccccctggtgcccgtggtcaggctggtgtgatgggattccctggacctaaa
ggtgctgctggagagcctggcaaggctggagagcgaggtgttcccggaccccctggcgct
gttggtcctgctggcaaagatggagaggctggagctcagggaccccctggccctgctggt
cccgctggtgagagaggtgaacaaggccctgctggctcccccggcttccagggtctccct
ggccccgctggtcctcccggtgaagcaggcaaacctggtgaacagggtgttcctggagac
cttggtgcccccggcccctctggagcaagaggcgagagaggattccctggcgagcgtggt
gtgcaaggtccccctggtcctgctggtccccgaggggccaatggtgctcccggcaatgat
ggtgctaagggtgatgctggtgcccctggagctcccggtagccagggtgcccctggcctt
cagggaatgcctggtgaacgtggtgcagctggtcttccagggcctaagggtgacagaggt
gatgctggtcccaaaggtgctgatggctctcctggcaaagatggcgtccgtggtctgact
ggccccattggtcctcctggtcctgctggtgcccctggtgacaagggtgaaactggtccc
agcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgagcctggt
ccccccggccctgctggcttcgctggcccccctggtgctgatggccaacccggtgctaaa
ggcgaacctggtgatgctggtgctaaaggcgatgctggtccccctggccctgccggaccc
gctggaccccctggccccattggtaatgttggtgctcctggacccaaaggtgctcgtggc
agcgctggtccccctggtgctactggtttccctggtgctgctggccgagtcggtcctcct
ggcccctctggaaatgctggaccccctggccctcctggtcctgctggcaaagaaggtggc
aaaggtccccgtggtgagactggccctgctggacgtcctggtgaagttggtccccctggt
ccccctggccccgctggcgagaaaggatcccctggtgctgatgggcctgctggtgctcct
ggtactcccgggcctcaaggtattgctggacagcgtggcgtggtcggcctgcctggtcag
agaggagaaagaggcttccctggtcttcctggcccctctggtgaacctggcaaacaaggt
ccctctggagcaagtggtgaacgtggtccccctggtcccatgggcccccctggattggcc
ggaccccctggtgaatctggacgtgagggagctcctggtgccgaaggttcccctggacga
gatggttctcctggccccaagggtgaccgtggtgagactggccccgctggacctcctggt
gctcctggtgctcctggtgcccctggccccgttggccctgctggcaagagtggtgatcgt
ggtgagactggtcctgccggtcccgctggtcctgtcggccctgttggcgcccgtggcccc
gctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacaaggcgacagaggc
ataaagggtcaccgtggcttctctggcctccagggtccccctggccctcctggctctcct
ggcgaacaaggtccctctggagcctctggtcctgctggtccccgaggtccccctggctct
gctggtactcctggcaaagatggactcaacggcctccctggccccattgggccccctggt
cctcgcggtcgcactggtgatgctggtcctgttggtccccctggccctcctggccctccc
ggtccccctggtcctcccagcggtggtttcgacttcagcttcctgccccagccacctcaa
gagaaggctcacgatggcggccgctactaccgggctgatgatgccaatgtggttcgtgac
cgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatccgg
agccccgagggcagccgcaagaaccccgcccgcacctgccgcgacctcaagatgtgccac
tctgactggaagagcggagagtactggattgaccccaaccaaggctgcaacctggatgcc
atcaaagtcttctgcaacatggagactggtgagacttgcgtgtaccccactcagcccagt
gtggcccagaagaactggtacatcagcaagaaccccaaggacaagaggcacgtctggttt
ggcgagagcatgaccgacggattccaggtgcttcgagtatggcggcgagggctccgaccc
tgccgacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaa
catcacctaccactgcaagaacagcgtggcctacatggaccagcagactggcaacctcaa
gaaggccctgctcctccagggctccaacgagatcgagatccgcgccgagggcaacagtcg
cttcacctacagcgtcactgtcgatggctgcacggtgagtggccagaatcctcaggcagg
gccccacctctctggccttgggctttttgggcaggccatagtgtcctctttccatcactc
ccacgtggtaatgccccctcccattgtctccgccccaccccagagtcacaccggagcctg
gggcaagacagtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgt
ggcccccttggacgttggtgccccagaccaggaattcggcttcgacgttggccctgtctg
cttcctgtaaactccctccatcccaacctggctccctcccacccaaccaactttcccccc
aacccggaaacagacaagcaacccaaactgaacccctcaaaagccaaaaaatgggagaca
atttcacatggactttggaaaatattttttttcctttgcattcatctctcaaacttagtt
tttatctttgaccaaccgaacatgaccaaaaaccaaaagtgcattcaaccttaccaaaaa
aaaaaaaaaagaataaataaataa
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