Theropithecus gelada (gelada): 112609382
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Entry
112609382 CDS
T08041
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03020
RNA polymerase
tge03420
Nucleotide excision repair
tge05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112609382 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
112609382 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
112609382 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tge03021
]
112609382 (POLR2A)
03400 DNA repair and recombination proteins [BR:
tge03400
]
112609382 (POLR2A)
Enzymes [BR:
tge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112609382 (POLR2A)
Transcription machinery [BR:
tge03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112609382 (POLR2A)
DNA repair and recombination proteins [BR:
tge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112609382 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
112609382
NCBI-ProteinID:
XP_025217820
Ensembl:
ENSTGEG00000024165
UniProt:
A0A8D2G1U3
LinkDB
All DBs
Position
16:63760960..63793467
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILSKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccttcgggggacagcgcatgcccgctgcgcaccatcaagaga
gtccagttcggagtcttgagtccggatgaactgaagcgaatgtctgtgacggagggtggc
atcaaatacccagagacgactgagggaggccgccccaagcttggggggctgatggacccg
aggcagggggtgattgagcggactggccgctgccagacatgcgcaggaaacatgacagag
tgtcctggccactttggccacattgaactggccaagcctgtgtttcacgtgggcttcctg
gtgaagacaatgaaggttttgcgctgtgtctgcttcttctgctccaaactgcttgtggac
tctaacaacccaaagatcaaggacatcctgtctaagtccaagggacagcccaagaagcgg
ctcacacatgtctacgacctttgcaagggcaaaaacatctgcgagggtggggaggagatg
gataacaagtttggtgtggaacaacctgagggtgacgaggatctgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgttccggcctagagctgtatgcg
gaatggaagcacgttaatgaggactctcaggagaagaagatcctgctgagtccagagcga
gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagccc
cgctatgcacgaccagagtggatgattgtcacagtgctgcctgtgcccccactctccgtg
cgacctgctgttgtgatgcagggctctgctcgtaaccaggatgacctgactcacaaactg
gctgacattgtgaagatcaacaatcagctgcggcgcaatgagcagaacggcgcagcggcc
catgtcatcgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gagctgcctggcttgccccgtgccatgcagaagtctgggcgtcccctcaagtccttgaaa
cagcggttgaagggcaaggaaggccgggtgcgagggaacctgatgggcaaacgagtggac
ttctcggcccgcactgtcatcacccccgaccccaacctctccattgaccaggtcggcgtg
ccccgctccattgccgccaatatgacctttgcggagattgtcacccctttcaacattgac
agacttcaagaactagtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgagacaatggcgatcgcattgacttgcgtttccaccccaagcccagtgaccttcacctg
cagaccggctataaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg
cagccaactctgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
acctttcgcttgaatctgagtgtgacaactccatacaatgcagactttgatggggatgag
atgaacttgcacctgccgcagtctctggagacgcgggcagagatccaggagctggccatg
gttcctcgcatgattgtcaccccccagagcaaccggcctgtcatgggtatcgtgcaggac
acactcacagcagtgcgcaaattcaccaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctgatgttcctgtcaacgtgggacgggaaggtgccacagccggccatcctg
aagccccggcccctgtggacaggcaagcagatcttctccctcatcatacctggtcacatc
aattgtatccgtacccacagcacccaccccgatgatgaagacagtggcccttacaagcac
atctctcctggggacactaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctctgggcacgtcagctggttccctggtccacatatcctacctagagatg
ggccatgacatcactcgcctcttctactccaacattcagaccgtcattaacaactggctc
ctcatcgagggtcataccattggcattggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcatcgagaaggca
cacaacaacgagctggagcccaccccagggaacactctgcggcagacctttgagaatcag
gtgaaccgcattcttaatgatgcccgagacaagactggctcctctgctcagaaatccctg
tctgaatacaacaacttcaagtctatggtcgtgtctggagctaaaggttccaagattaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaaacggattccattt
ggcttcaagcaccggactctgcctcacttcatcaaggatgactacgggcccgagagccgt
ggctttgtggagaactcctacctagccggcctcacccccaccgagttctttttccacgcc
atggggggtcgtgaggggctcattgacacggctgtcaagactgctgagactggatacatc
cagcggcgactgatcaagtccatggagtcagtgatggtgaagtacgacgcgactgtgagg
aactccatcaaccaggtggtacagctgcgctacggcgaagacggcctggcaggcgagagc
gttgagttccagaacctggctacgctgaaaccttccaacaaggcttttgagaagaagttc
cgctttgattatactaatgagagggccctgcggcgcactctgcaggaggacctggtgaag
gacgtgctgagcaacgcacacatacagaacgagttggagcgggaatttgagcggatgcgg
gaggatcgggaggtgctcagggtcatctttccaactggagacagcaaggttgtcctcccc
tgtaacctgctgcggatgatctggaatgctcagaaaatcttccacatcaacccacgcctt
ccctccgacctgcaccccatcaaagtggtggagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccactaagtcggcaggcccaggaaaatgccacgctgctc
ttcaacatccacctgcggtccacgttgtgttcccgccgcatggcggaggagtttcggctc
agtggggaggccttcgactggctgcttggggagattgagtccaagttcaaccaagctatt
gcccatcctggggaaatggtgggagctctggctgcacagtcccttggagaacctgccacc
cagatgaccttgaataccttccactatgctggtgtgtctgccaagaatgtgacgctgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccttcacttact
gtcttcttgttgggccagtctgctcgagatgctgagagagccaaggatattctgtgccgc
ctggagcatacaacgttgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacggtggtggcagaggaccaagagtgggtgaatgtctactatgaaatgcct
gactttgatgtggcccgaatctccccctggctgttgcgggtggagctggatcggaagcac
atgactgatcggaagctgaccatggagcagattgctgaaaagatcaatgctggttttggt
gatgacttgaactgcatctttaatgatgacaacgcagagaagctggtgctccgtattcgc
atcatgaacagcgatgagaacaagatgcaggaggaggaagaggtggtggataagatggat
gatgatgtcttcctgcgctgcattgagtccaacatgctgacagatatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaaaatc
atcatcacagaggacggggaattcaaggccctgcaggagtggatcctggagacggacggc
gtgagcttgatgcgggtgctaagtgagaaggatgtggaccccgtgcgcaccacgtccaat
gacatcgtggagatcttcacggtgctgggcattgaagctgtgcggaaggccctggagcgg
gagctgtaccatgtcatctcgtttgatggctcctatgtcaattaccgacacttggctctc
ttgtgtgataccatgacctgtcgtggccatttgatggccatcacccgacacggagtcaac
cgccaggacacaggaccactcatgaagtgttcctttgaggaaacggtggatgtgcttatg
gaagcagccgcacacggcgagagcgaccccatgaagggggtctctgagaatatcatgctg
ggccagctggctccagccggcactggctgctttgacctactgcttgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccccggcctgggggctgctggacccaccggc
atgttctttggctcagcacccagtcccatgggtggaatctctcctgccatgacgccttgg
aaccagggtgcaacccctgcctacggcgcctggtcccccagtgttgggagtggaatgacc
ccaggggcagctggcttctctcccagtgctgcatcagatgccagtggcttcagcccaggt
tactcccctgcctggtctcccacacccggctccccggggtccccgggtccctcaagccct
tacatcccttcaccaggtggtgccatgtctcccagctactcgccaacgtcacctgcctac
gagccccgctctcctgggggctacacaccccagagtccctcttattcccccacttcaccc
tcctactcccctacctctccatcatattctccaaccagtcccaactatagtcccacatca
cccagctactccccgacctctcccagctactcgcccacctctcccagctactcacccacc
tctcccagctactcacccacctctcccagctactcgcccacctctcccagctactcgccc
acttcccctagctactcgcccacctctcccagctactcgccgacatctcccagctactca
ccaacatctcccagctactcgccaacttcacccagctattctcccacttcccccagctac
tcaccaacctctccaagctattcacccacctcccccagctactcacccacttccccaagt
tactcacccaccagcccgaactattctccaaccagtcccaattacaccccaacgtcaccc
agctacagcccaacatcacccagctattcacctactagtcccaactacacgcctaccagc
cctaactacagcccaacctctccaagctactctccaacatcacccagttactccccgacc
tcaccaagttactccccttccagcccacgatacacaccacagtctccaacctatacccca
agctcacccagctacagccccagctcgcccagctacagcccaacctcacccaagtacacc
ccaaccagtccttcctacagtcccagctccccagagtataccccaacctcccccaagtac
tcacctaccagtcccaaatattcacccacctctcccaagtactctcctaccagtcccacc
tattcacccaccaccccgaaatactccccaacatcccctacttattccccaacctctcca
gtctacaccccaacctctcccaagtactcacctactagtcccacttactcgcccacttct
cccaagtactcacccaccagtcccacctactcgcccacctctcccaaaggctcgacttac
tctcccacttcccctggttactcgcccaccagccccacctacagcctcaccagcccggcc
atcagcccggatgacagtgatgaggagaactga
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integrated database retrieval system
