KEGG   Theropithecus gelada (gelada): 112610619
Entry
112610619         CDS       T08041                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
tge  Theropithecus gelada (gelada)
Pathway
tge03410  Base excision repair
tge04140  Autophagy - animal
tge04217  Necroptosis
tge04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:tge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112610619 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112610619 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    112610619 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    112610619 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tge03036]
    112610619 (HMGB1)
   03400 DNA repair and recombination proteins [BR:tge03400]
    112610619 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tge04147]
    112610619 (HMGB1)
Chromosome and associated proteins [BR:tge03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    112610619 (HMGB1)
DNA repair and recombination proteins [BR:tge03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     112610619 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     112610619 (HMGB1)
Exosome [BR:tge04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112610619 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 112610619
NCBI-ProteinID: XP_025219760
Ensembl: ENSTGEG00000020974
UniProt: A0A8D2FUN4
LinkDB
Position
17:complement(62070340..62225777)
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccgttacgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctgttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaggaagatgaagaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa

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