Theropithecus gelada (gelada): 112612299
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Entry
112612299 CDS
T08041
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
tge
Theropithecus gelada (gelada)
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112612299 (PTBP1)
03041 Spliceosome [BR:
tge03041
]
112612299 (PTBP1)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112612299 (PTBP1)
Spliceosome [BR:
tge03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112612299 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
112612299
NCBI-ProteinID:
XP_025222452
Ensembl:
ENSTGEG00000009045
LinkDB
All DBs
Position
19:709164..724189
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AA seq
558 aa
AA seq
DB search
MRRGSIVPDIAVGTKRGSDELFSTCVTNGPFIMSSSNSAANGNDSKKFKGDSRSAGVPSR
VIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTP
VLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAG
QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL
SLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGA
PGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG
AGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSH
LNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPS
ATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHN
HDLGENHHLRVSFSKSTI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggggcagcattgtcccagatatagccgttggtacaaagcggggatctgacgag
cttttctctacttgtgtcactaacggaccgtttatcatgagcagcagcaactcggcagca
aacggaaatgacagcaaaaagttcaaaggtgacagcagaagcgccggcgtcccctccaga
gtgatccacatccggaagctccccatcgatgtcacagaaggagaggtcatctccctgggg
ctgcccttcgggaaggtcaccaacctcctgatgctgaaggggaaaaaccaggccttcatc
gagatgaacacggaggaggctgccaacaccatggtgaactactacacctcggtgacgcca
gtgctgcgcggccagcccatctacatccagttctccaaccacaaggagctgaagaccgac
agctctcccaaccaggcgcgggcccaggcggccctgcaggctgtgaactcggtccagtcg
gggaacctggccttggctgcctcggcggcggccgtggacgcaggaatggcgatggctggg
cagagccccgtgctcaggatcatcgtggagaacctcttctaccccgtgaccctggatgtg
ctgcaccagattttttccaagttcggcacggtgttgaagatcatcaccttcaccaagaac
aaccagttccaggccctgctgcagtatgcggaccctgtgagcgcccagcacgccaagctg
tcgctggacgggcagaacatctacaatgcctgctgcacgctgcgcatcgacttttccaag
ctcaccagcctcaacgtcaagtacaacaatgacaagagccgcgactacacgcgcccagac
ctgccctccggggacagccagccctccctggaccagaccatggccgcggccttcggtgca
cctggtataatctcagcctctccgtatgcaggagctggtttccctcccacctttgccatt
cctcaagctgcaggcctttccgttcccaacgtccacggagccctggcccccctggctatc
ccctcggcggcggcggcagctgcagcggcaggccggatcgccatcccgggcctggcgggg
gcaggaaattctgtattgctggtcagcaacctcaacccggagagagtcacaccccaaagc
ctctttattcttttcggcgtctacggcgacgtgcagcgcgtgaagatcctgttcaataag
aaggagaacgccctggtgcagatggcggacggcaaccaggcccagctggccatgagccac
ctgaatgggcacaaactgcacgggaagcccatccgcatcacactgtcaaagcaccagaac
gtgcagctgccccgcgagggccaggaggaccagggcctgaccaaggactatggcaactca
cccctgcaccgcttcaagaagccgggctccaagaacttccagaacatattcccgccttca
gccacgctgcacctctccaacatcccaccctccgtctccgaggaggatctcaaggttctg
ttctccagcaatgggggcgtcgtcaaaggattcaagttcttccagaaggaccgcaagatg
gcactgatccagatgggctctgtggaggaggcggtccaggccctcattgacctgcacaac
catgacctcggggagaaccaccacctgcgggtctccttctccaagtccaccatctag
DBGET
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