KEGG   Theropithecus gelada (gelada): 112612407
Entry
112612407         CDS       T08041                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
tge  Theropithecus gelada (gelada)
Pathway
tge03018  RNA degradation
tge03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tge00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112612407 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112612407 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tge03019]
    112612407 (LSM4)
   03041 Spliceosome [BR:tge03041]
    112612407 (LSM4)
Messenger RNA biogenesis [BR:tge03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112612407 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112612407 (LSM4)
Spliceosome [BR:tge03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112612407 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 112612407
NCBI-ProteinID: XP_025222662
Ensembl: ENSTGEG00000014127
LinkDB
Position
19:complement(17862967..17883122)
AA seq 241 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGGSPIPSGHTW
GGRTATRGILPSRGWPSWLVPMQHCLGASQPSRAPFLVFGHEPRPSQRSLETWDSVLLSL
RLLVVLRAHQVTSPSLSFLSERVWRCPPLQAAGKDSTWGLVWGPFPAVALSRAKVTRPHQ
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgttgaagacggctcagaatcaccccatgttggtggagctgaaa
aatggggagacgtacaatggacacctggtgagctgcgacaactggatgaacattaacctg
cgagaagtcatctgcacatccagggacggggacaagttctggcggatgcccgagtgctac
atccgtggcagcaccatcaagtacctgcgcattcctgatgagatcattgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaaa
ggccgcggcatgggcggcgccggccgaggtgggtctcccatccccagtggacatacctgg
ggtgggaggacagccacacgtggcatccttccttctcggggttggccttcttggctagtg
cccatgcagcactgcctcggagcctcccaaccctcccgggcccccttcctggtctttggc
catgagccaaggcccagccagaggagcctggagacctgggactcagtcctcctctcactg
cgcctcctggtagtcctcagggcacatcaagtcacctccccaagcctcagtttcctctct
gagagggtctggcggtgcccacctctccaggccgctggcaaggactccacttggggcctg
gtgtggggccctttccctgccgtggctctatccagagccaaggtcacccgcccccaccag
agatga

DBGET integrated database retrieval system