Theropithecus gelada (gelada): 112613420
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Entry
112613420 CDS
T08041
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112613420 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112613420 (XAB2)
03041 Spliceosome [BR:
tge03041
]
112613420 (XAB2)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112613420 (XAB2)
Spliceosome [BR:
tge03041
]
Complex B
Other components
Prp19-related factors
112613420 (XAB2)
Complex C
112613420 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
112613420
NCBI-ProteinID:
XP_025224693
Ensembl:
ENSTGEG00000021259
UniProt:
A0A8D2FXD2
LinkDB
All DBs
Position
19:complement(7639062..7649694)
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AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIIINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagtttaaacagggcgccccaaagcccaggctcaatcagctatacgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctacgaagatgtcaacaactgtcatgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacacacccgccgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgcccgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaacgacgagcgtttcgtgtctaaggccggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgtgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tcgctcgccgactactacatccgcagcggccacttcgagaaggctcgggatgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcc
cagttcgaggagagcatgatcgccgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggacgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccga
cgtcccctgctgctcaacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtgg
cacaagcgcgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagttggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggccacg
gcgctgcctgcccgccgggccgagtactttgatggctcagagcccgtgcagaaccgcgtg
tacaagtcgctgaaggtctggtccatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaagccgtgtatgaccgcatcctggacctgcgcatcgcgacaccccagatc
atcatcaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgagcgcgggacctgttt
gaacaggctctggacggctgtcccccaaaatatgccaagaccttgtacctgctgtacgca
cagctggaggaggagtggggcctggctcggcatgccatggccgtgtacgagcgtgccacc
agggctgtggagcccgcccagcagtatgacatgttcaacatctacatcaagcgggcggcc
gagatctatggggtcacgcacactcgcggcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcgcgtgagatgtgcctgcggtttgcagatatggagtgcaagctcggggag
atcgaccgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacgacc
ggcgcgttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcgtatccggcgcagcgtgcaggccacgtacaacacacaggtcaacttc
atggcctcgcagatgctcaaggtctccggcagtgccacgggcaccgtgtctgacctggcc
cccgggcagagcggcatggacgacatgaagctgctggaacagcgggcagagcagctggcg
gctgaggcggagcgcgaccagccctcgcgtgcccagagcaagatcctgttcgtgaggagt
gacgcctcccgggaggagctggcggagctggcacagcaggtcaaccccgaggagatccag
ctgggcgaggacgaggacgaggacgagatggacctggagcccaacgaggttcggctggag
cagcagagcgtgccagccgccgtgttcggcagcctgaaggaagactga
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