Theropithecus gelada (gelada): 112613861
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Entry
112613861 CDS
T08041
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112613861 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tge04121
]
112613861 (SLX4)
03400 DNA repair and recombination proteins [BR:
tge03400
]
112613861 (SLX4)
Ubiquitin system [BR:
tge04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112613861 (SLX4)
DNA repair and recombination proteins [BR:
tge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112613861 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
112613861
NCBI-ProteinID:
XP_025225523
LinkDB
All DBs
Position
20:49400072..49467280
Genome browser
AA seq
2350 aa
AA seq
DB search
MGQDTPAFRIHRHQVQATPQEAEELGTSSGGGLQHQRHGARTGQPPAVKIQSPSKATRGF
GVLPGSTPASSTCQKAGWNLGLAVQMASTACHVAALRMGFGDGSIALEEPGQLGWLCCLG
LVLGLSWRDCSSLGTLFPQHGRWRLPEHMQDTRRPKAEVDPAAVASAHIPWALSSCRSKP
HIGTAAPAQLLSILPSQCPRKTGPRGSKKCGSPPKACLCHAAGRLSGPSSWGLLNRGRLL
RCKPHDSWAPPAAPKARPRPWQALMENMLDERALVELNCLEKPFHGEGVAQKRPSRRGGL
QDRRLPSLGSVEDAVPPCAPDSPPAMSGSPEGLPVLGPRAFSLQGPSPGNRKAAQEESRQ
GGGFLGSSPVAHMEGWLLIGATPLPTMELQQGHAGHHQPPRHTTAAVDGVSGRNSICSKR
HFRLAPPPSDRKRWPPRAAPGAAEEDGKEKSLSLPSPSLTPWPLQVRSPGGEAGAALGWR
GAGARLEGGGWLICIPTAVSVRASPGIGVLRLTLEPCVNEAQLGFYLGSLSHLSACPGID
PRSSEDQPESLKTGQXMDESDEDFKELCASFFQRVKKHGIKELSGERKTQNASSNGTQVR
RKLKRTKQTATKTKTLQGPAEEKPPSGSQAPRTKKQGVTKWQTSEPALSVNGEARVLAST
PDQPVLWETAQNTQTGNQQEPSPNLSREETRENAPNSDSQPPPSCLTTAVPSPSKPRTAQ
LVLQRMQQFKRADPERLRHASEECSLEAAQEENVPKDPQEEMMARNVFGLGPPAPESDAA
VALTLQQEFARVGASAHDDSLEEKGLFFCQICQKNLSAMNVTRREQHVNRCLDEAEKALR
PSVPQIPECPICGKPFLTLKSRASHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSLPVS
SNFSFWLPSRFSDHGGGLKRRGPASKKEPRKRRKVDKAPSEDLLVAMALSRSEMEPCAAV
PALRLESAFSERIKPEAEKKSRKKKPPVSPPLLLVQDSETTGRQIADRVALLLSEEVELS
STPPLPASRILKEGWERAGQCPPPPECKQSFLWEGSALTGAWAMEAFYTARLVPPLVPQR
PAQGLMQEPVLPLVPPEQSERRSPALHITPHAGCGSRGPSPSASQREHQALQDLVDLVRE
GLSASPWPSSGGLAAGEMLGLDVVPGGLPLTGFVVPSQDKHPERGGRTSLSLGLLVADFG
AMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVNNEGFSAVEDGILTQRVLLGD
VSTEAACAFLHYLYTADTGLPPGLSSELSSLAHRFGVSELVHLCEQVPVTTDSGGKPREE
KEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHEEDQENVNEAEMEEIYEFAATQR
KLLQEEKAVGAGEDADWLEGGSPVSGQLLASVQVQEQSDKVEEMEPSEPGRDEATTTWEK
VGQCPLPPPQGQRSGAWGAEAPEQEALGRSCCSSPPRGCRAERKEGPLPHSDDAGDYEQL
FSSTQGEISEPSQVTSDPEERSGTVRERRLEVSHRLAPWQVSPPHPCRFLLGPPQGGSPR
GSHQPHRTSGLPLSTPRSRGGTSQVGSPTSLSPTVPSKQKRDRSILTLSKEPGHQKGTER
RSMLECRNKEVLMSPEKSLSIDLTQSNPDHLSSTSQKSPSKVNKDDEVILLLDSDEELEL
EQTKMKSISSDPLEERKALEISPRSCELFSVIDVDADQERSHSPPRREAALQREDEGALP
ENRGSLGSRGAPWLFCDRESSPGEGSTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLA
VEAVTQHTPRASVGNREGNEAAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHKSP
SRPHPGGHPHSSPLAPRPISGDCAHFSRRFLKHSPPGPSFLNQTTASEVVEVGDSDDEQE
VASHQANSSPPLDSDPPIPVDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMKEAAD
SCDCRSPGPLDTTPIRGSCAARRKSQVGAGSPGNSRLSFLNSALWDDWDGEEQRPSETPP
LAQMLSVGGAQKPEGLETPKGVHRKKDLPPKVPITPMPQYSIMETPVLKKELDRFGVRPL
PKRQMVLKLKEIFQYTHQTVDSDSEDESQSSQPLLQAPRCQTLASQTYKPSRAGAHAQQE
ATTGPGTHRPKGPAKTKGPQHQRNHHESIAPAPPSRSPTKEAPPGLDDDAQLPASQESVA
TSVDGSDSSLSSQSSSSCEFGAAFESAGEEEEGEEEVSASQAAVQAADTDEALRCYIRSK
PALYQKVLLYQPFELGELQAELKQNGLRVSSRRLLDFLDTHCITFTTAAARREKLQGRRR
WPRGKKAARN
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgggccaggacacgcctgccttccggattcatcgccatcaggtgcaggcaaccccgcag
gaggctgaggagcttggaacaagcagcggcgggggcctgcagcaccagcgccatggggct
aggacaggacagcctccagctgtcaaaatccagtccccaagcaaggccaccagaggattt
ggtgtgctcccaggcagtacccctgcttcctctacctgccagaaggcaggctggaacttg
ggcctcgctgtacaaatggcgagcactgcctgccatgtggctgccctcaggatgggcttt
ggtgacggcagcatagccctggaggagcctggtcagctgggatggctctgctgcctgggc
ctcgtcctgggactgagctggagggactgcagctccctgggcaccctcttcccacagcat
ggaaggtggaggctcccagagcacatgcaggacacgcgccgccctaaggctgaggtggac
ccggctgctgtcgcttctgcccacattccatgggcgctgtcgagctgcaggtccaagccc
catatcgggacagccgcccctgcccagcttctcagcatcctgcccagccagtgccccagg
aagacgggcccgcgtgggagcaagaagtgcggctcacctccgaaagcttgcctgtgtcat
gctgctgggcggctctccggtccttcaagctggggccttctgaaccgtggccggctcctc
agatgcaagccccacgacagctgggctccgccggcagcaccgaaagcaaggcctaggccg
tggcaggcgctcatggagaatatgctggatgaaagggcacttgtggagctgaactgtttg
gagaagccatttcacggggaaggagtcgcacaaaagaggccttcccgcaggggtggcctc
caggacagacgcctcccaagcctgggatcggtggaagatgccgtccctccctgtgcccca
gactccccaccagccatgagcggctccccagagggcctgcccgtgctgggccctcgagca
ttctccctccaagggcccagccctgggaacaggaaagcagcccaggaggagagcaggcaa
ggcggtggcttcctaggctcctcccctgtggcccacatggaggggtggctgctcatcggg
gccacgcccctccccaccatggagctgcagcagggccacgctggccaccaccagccaccc
cgccacacaactgcagccgtggatggggtctcgggcaggaactccatctgcagcaagcgc
cacttccgcctcgccccgcctccttccgaccggaagcgctggccgccgcgcgccgcgccc
ggagccgcagaggaagacgggaaggagaagagcctttctctcccgtctccctcgctgact
ccgtggcctctgcaggtccgcagccccggcggagaggcaggagccgcgctcgggtggaga
ggggccggggcccgcctggagggaggagggtggctgatctgtatccccacggcggtctcg
gttcgggccagtccggggatcggggttctccgtctgactttagagccctgtgtgaatgag
gctcagctaggcttctacttgggttcactttctcatctgtctgcatgtcccgggattgac
cctcgctcctctgaagaccagcctgaaagccttaaaactggtcagntgatggatgagtct
gatgaggactttaaagaactctgcgctagctttttccaaagggtgaaaaaacatggaatc
aaggagctgtcaggagaaaggaagacacaaaacgcctcctcaaacggcactcaggtaaga
cgcaaattgaaaaggaccaaacaaactgctaccaagaccaaaacccttcaaggccctgca
gaggagaaacctccatctggcagccaggcccctaggactaaaaagcaaggggtaaccaaa
tggcaaacaagtgaaccggccctctctgtgaatggggaggcacgtgtgctcgcctctact
ccagatcagcctgtgctctgggaaacagcacaaaacacccagacgggtaaccagcaagaa
ccatcgccaaacctttccagagaggaaaccagagagaatgcgcccaacagcgactctcag
cctcctccttcctgtttgacaacagcagtgccaagtccctccaaaccccgcacagcacaa
ttggtcctacagcgaatgcagcagttcaagagagcagaccccgagcgtttgagacatgct
tcagaagagtgctccctcgaggctgcacaggaagaaaatgtcccaaaggatcctcaagag
gagatgatggcgaggaatgtgtttgggcttgggccccctgccccagagagcgacgctgcg
gtggccttgaccctgcagcaggagtttgcacgggtaggagcatcggcacatgatgatagc
ctggaggaaaaagggttgttcttctgccagatttgtcaaaagaacctctcagccatgaac
gtgacccgaagggaacagcatgtaaacaggtgcctggatgaagccgaaaaggcactaaga
ccttccgtgcctcagatccctgagtgcccgatttgtgggaaaccgtttctgaccttaaag
agcagagccagccacttgaagcagtgtgctgtgaagatggaggttggcccccagctcctg
ctgcaggccgtccggctgcagacagcacagcctgaggggagcagcagcctgccagtgtcc
agcaacttttctttttggctgccttctcgcttcagtgatcacggtggaggtctgaaacgg
aggggacccgccagcaagaaggagccacggaagaggcggaaggtggacaaggcaccgtcc
gaggacctgctggtggccatggctctgtcccggtcggagatggagccgtgtgcggctgtg
ccagcgctcaggctggaaagtgccttttctgagaggataaaaccagaagcagagaagaaa
agtcgcaagaagaaacccccagtgtctcccccattgttgttagtccaggactctgaaacc
acaggccgacagatagcggaccgtgtggccctgctcctctctgaggaagtggaattgtct
agcacgccaccacttcctgccagcaggattttaaaggaagggtgggaaagagcgggccag
tgtcctcctccacctgaatgcaagcagagctttctgtgggagggcagtgcactgactggg
gcctgggccatggaggccttctacacggccaggctggtccctcccctcgtgccccagcgg
cctgcccagggcctcatgcaggagcctgtgctgccgctggtgccacctgagcagtcagag
cgaaggtcacccgctctccacatcaccccccatgcaggctgtggctccaggggaccgtcg
ccttcggccagccagagggagcaccaggccctgcaggacctcgtggacctggtgagggag
ggactgagcgccagcccgtggcccagcagtgggggcctggctgcaggtgagatgctgggg
ttggacgtggtgcccggcggccttcctctgactgggtttgtggtgccatcgcaggacaag
cacccggaaaggggcggccgcacctcgctctccctagggctgctggttgctgactttggt
gccatggtcaataacccacacctgagtgatgtccagttccagacagacagcggggaggtg
ctttacgcccacaagttcgtgctttatgcccgatgcccgctcctcatccagtatgtgaac
aacgaaggcttctccgctgtagaggacgggattctgacccagcgtgtcctgctgggtgac
gtgagcactgaggccgcctgcgcattcctgcactacctctacaccgcggacactggcctt
cctcctggcctgagctctgagctgagttccctggcccacaggtttggtgtgagcgagctt
gttcacctgtgcgaacaggtgcctgtcaccacggactcagggggcaaaccacgggaggag
aaggaagccgagaattgcgaaagcagggccgagaatttccaggaactcttgaggtcaatg
tgggcagatgaagaggaggaagcggagactttgttgaaatccaaggaccacgaagaagat
caagaaaacgtgaatgaagcagaaatggaagaaatttatgaattcgcagctactcagcga
aagctgctccaggaagaaaaagcagtgggagctggcgaggatgctgactggctggaaggt
ggcagtccggtttctgggcagctcctagcaagtgtccaggtgcaggaacagtcggacaag
gtggaggagatggagccgtcggagccaggaagagatgaggccaccaccacctgggagaag
gtgggacagtgccctctcccaccaccccagggccagcgctcaggggcatggggagcagag
gcccccgagcaggaggcgcttggccgttcctgttgctccagccctcccaggggctgccgc
gcagagagaaaagaaggcccccttccgcactcggatgatgccggtgattacgaacagctc
ttctcatcaactcagggagagatctcagagccgtcccaagtaacaagtgaccctgaggaa
cgaagtggcactgtcagggaaaggagactggaggtttctcatcgcctggctccctggcag
gtgtctccaccacacccgtgccgcttcctactggggcctccccagggcgggagtccccgc
gggtctcatcagcctcatcgcacaagcgggttgcccctgtcgacaccccggtcccgtggc
ggaacttcccaggtgggctccccaacctcgctgtctccaactgtgccatcaaagcagaaa
agggacaggagcatcctcacgctgtctaaagagccaggccaccagaaaggcacagagcgt
cggtccatgctggagtgcagaaataaggaggtcctgatgtccccagaaaaatctctgtcc
attgacctaacccagtcaaatcctgaccatttgagctccacatctcagaagtctccatcc
aaagtgaacaaagacgacgaggtcatcctcttactggactcggatgaggagctagagcta
gaacaaaccaaaatgaagtccatttctagtgatcctctggaagaaaggaaagctctagaa
attagccctaggtcctgtgagctgttctccgtcattgacgtcgatgcagatcaggaacgt
tcccacagcccaccaagaagggaagctgcgctgcagcgggaggatgagggggcgctgccg
gagaaccggggctctttgggcagcagaggggctccctggctgttctgcgaccgtgagagc
agccccggcgagggcagcaccacagacacctcatggctggtgcccgccaccccgctggcc
agcagaagccgcgactgttcttcccagacccaaatcagcagcctcaggagcgggctggcc
gtggaggcggtgacacagcacacgcccagggcctcggtaggaaacagggaagggaacgag
gctgcacagaagttttccgtcatcaggccccagacaccaccgccccagacaccgtcctcc
tgcctcactcccgtctctccaggaacttctgacggcagaaggcaaggccacaaaagccct
tcccgtccccaccctgggggccacccgcactcctctccgctggctccacgtcccatctca
ggggactgtgcccacttcagcaggcggttcctgaaacactcgccgcctgggccaagcttc
ctgaaccagaccacagcgagtgaagtggtggaagtcggggacagtgacgatgagcaggag
gtggcctcccatcaggccaacagcagccccccgctggacagtgaccctccaattccagtt
gacgactgctgctggcacatggagcccctctcgccaattcccattgatcactggaacctg
gagcggaccggccccctgagcaccagcagccccagccgcaggatgaaggaggccgccgac
agctgtgactgccgctccccgggacccctggacaccacccccatccgaggaagctgcgct
gcccggaggaaatcgcaagtgggcgcgggttccccggggaacagcaggctgagctttctg
aattcggctctgtgggacgattgggacggggaagagcagaggccttcagagacccctcct
ctagcgcagatgctaagcgtcggtggagctcagaagcccgaagggttagagacacccaaa
ggtgtacatcggaagaaggacttgcctcccaaagtgcccataacgccgatgccacagtat
tccattatggagacgccggtgctgaagaaggaactggataggtttggagtccgccctctg
cctaaacgccagatggttctgaagctgaaggagatattccagtacactcaccagaccgtg
gactcagactctgaggatgagagccagtcctcacagccgctactgcaggcgcctcgctgc
cagaccctcgcctcccagacctacaagccttcaagggcaggggcccatgcccagcaggag
gccaccacaggacccgggacccataggcccaagggacctgctaagaccaagggcccccaa
catcaaaggaatcatcatgaaagcatcgcacccgcacccccaagcaggtcgcccaccaag
gaggcacctccaggccttgatgatgatgcccagctcccagcctcccaggaatccgtggcc
acttctgtggacggcagtgacagctccttgagctcacagagttcttcctcctgtgagttt
ggagcggcatttgagtctgcaggtgaagaggaggagggtgaggaggaggtcagcgcctcg
caggcagccgtgcaggcggcggacacggatgaggcgctgagatgctacatccgctccaag
ccggccctgtaccagaaggtgctgctgtaccagccctttgagctgggggagctgcaggcg
gagctgaagcagaacggcctccgtgtatcctcgcgcaggctactggacttcctggacacc
cattgtatcaccttcaccaccgccgctgcccgcagggagaagctccagggcaggaggcgg
tggcctcggggcaagaaggcggcgcggaactga
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integrated database retrieval system
