Theropithecus gelada (gelada): 112614387
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Entry
112614387 CDS
T08041
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112614387 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112614387 (PARN)
Enzymes [BR:
tge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112614387 (PARN)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112614387 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
RhaA
Motif
Other DBs
NCBI-GeneID:
112614387
NCBI-ProteinID:
XP_025226663
Ensembl:
ENSTGEG00000025194
UniProt:
A0A8D2G4V5
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All DBs
Position
20:68039844..68238849
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AA seq
639 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFSPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVKIAVNTSKYAESYRIQTYAEYMGKKQEEKQIKRKWTEDGWKEADSKRLN
PQCIPYALQNHYYRNNSFTAPSTVGKRNLSPSQEEAGLEDGVSGEISDAELEQTDSCAEP
LSEGRKKAKKLKRMKKELSPAGSISMNSPATLFEVPDTW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
tctgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctatttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacgaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcaaagctccagcattgactttctagcaagccaggga
tttgattttaataaagtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgttcacaggcgaatggtgcaggagctctgtcc
tacgtatctcctaacacttcaaaatgtcctgtcacgattcctgaggatcaaaagaagttt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtaccgggttccaaagaaaactaatttatcagactttgagttggaag
tatccgaaaggcattcatgtggagactttagaaactgaaaagaaagagcgatacatagtt
atcagcaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgccaaagaa
caggaggagctgaatgatgctgtggggttttctagagtcattcatgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggacgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacttaagtgagtttaaagagatgacaacatgtgttttcccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcgtttaaaagagacacctttcagccctcctaaagtt
gaaagtgccgaaggttttccaagttatgacacagcctctgaacaactccacgaggcaggc
tacgatgcctacatcacagggctgtgcttcatctccatggccaattacctaggttctttt
ctcagccctccaaaaattcatgtgtctgccagatcaaaactcatcgaacctttttttaac
aagttatttcttatgagggtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaagcgtgatcatgttctgcatgtgacgttccccaaagaatggaaaaccagcgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggattgatgacacatca
gcatttgtttcccttagccagcccgagcaagtaaagattgctgtcaataccagcaaatat
gcagaaagctatcggatccaaacctatgctgaatatatggggaaaaaacaggaagagaag
cagatcaaaagaaagtggactgaagatggctggaaggaggctgacagcaaacggttaaac
ccccagtgcataccctacgccctgcagaatcactattaccgcaacaatagttttacagct
cccagcacagtaggaaagagaaatttgagtcccagtcaagaggaagctggcctggaggac
ggagtgtcgggggagatttccgacgctgagcttgagcagactgactcctgtgcagagccc
ctctcagagggaaggaaaaaggccaagaaattaaaaagaatgaagaaggagctttctcca
gcaggaagcatctcgatgaacagccctgccacactctttgaagttcctgacacatggtaa
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