Theropithecus gelada (gelada): 112614581
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Entry
112614581 CDS
T08041
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03440
Homologous recombination
tge03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112614581 (PALB2)
03460 Fanconi anemia pathway
112614581 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tge03400
]
112614581 (PALB2)
DNA repair and recombination proteins [BR:
tge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
112614581 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
112614581 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
zinc_ribbon_16
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
112614581
NCBI-ProteinID:
XP_025227041
Ensembl:
ENSTGEG00000019466
LinkDB
All DBs
Position
20:60674551..60711545
Genome browser
AA seq
1192 aa
AA seq
DB search
MTVPATFKELDDGEKQRTQCENTVLKEKLAFLKREYSKTLARLQRAQRAEKIKHSIKKTV
EEQDYLSQQELSPQLNHSEPKNKICVYDKLHIKTHLDEETGERTSVTLDVGPESFNPGDG
PGGLPIHGTDDTQEHFPHRVSDPDGEQKQKLPGRRKKQQKRTFISQERDCVFGTDSLRLS
GKRLKEQEETSSKNPTRSPVTEIRTHLLSLTSELPDSPEPVTETNEDSIFIPPTAQPEKG
VDTLLRRPDFTRATTVPLQTPTDSSSSQHLEHIPPKGSSELTTHGLKNIRFTSPVSLEAQ
GKKVTIPTDNLVVNKAVSKSGQLPTSSNLEADISCSLNELTHNNLPANENQNLEQNQTEK
SLKSPTDALDGRNENLQENEILSQPKSLSLEATSLLSAEKHSCTMLEGLLFPAEYYVRTT
RSMSNCQRKVALEAVIQSHLDVKKKGFKNKNKDASKNVNLSNEEPDQSEIRMSDTCTGQP
SSRTSQKLLSLTKVSSPAGPTEDNDLSRKAVAQAPSRRYRGKRKSACTPASDHCEPLLPA
CNPSVINRSKEEVTSHKYQNKKAVIRVKGKKSHQKEDSLSWSNSAYLSLDDDAFTASFHK
DGMLSLKQLLSFLSITDFQLPDEDFGPLKLEKLKSCSEKPVEPFESNMFGERHLKEGNCI
FPEELSPKRMDTEMEDLEEDLIVLPGKSHPKRPNPQSQHTKTGLSSSILLYTPLNTVALD
DNDRPATDMCSPLFPILGTTPAFGPHGSYEKASTEVAGQTCRTPQLAHLKDSVCLASDSK
QFDSSSSPAKPHTTLQVSGRQGQPTCDCDSALPGTPPPIESFTFKENQLCGNTCQGLHKH
SVEQTETAELPASDSVNPGNLQLVSKLKNPSGSCSVDVSAMFWERAGCKEPCIITACEDV
VSLWKALDAWQWEKLYTWHFTEVPVLQIVPVPDVYNLVCVALGNLEIREIRALLCSSDDE
SEKQVLLKSGNIKAVLGLTKRRLVTSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL
TFAEVQGMQEALLGTTVMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVL
SHPCAKESESLQSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTS
GTIAIWDLLLGQCTALLPPISDQRWSFVKWSGTDSHLLAGQKDGNIFVYHYS
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccctgctaccttcaaggaactggatgatggggagaaacagagaacacagtgt
gagaatactgtgttaaaggagaaattagcattcttgaaaagggaatacagcaagacacta
gcccgccttcagcgtgcccaaagagctgaaaagattaagcattctattaagaaaacagta
gaagaacaagattatttgtcccagcaggagctctcaccgcagctaaaccactcagaacct
aaaaataaaatatgtgtttatgacaagttacacatcaaaacccatcttgatgaagaaact
ggagaaaggacatctgtcacacttgatgttgggccggagtcttttaaccctggagatggc
ccaggaggattacctatacacggaacagatgacacccaagaacattttccccacagggtc
agtgaccctgatggtgagcaaaagcagaagctgccagggagaagaaagaagcagcagaag
agaacatttatttcacaagagagagactgtgtctttggcactgattcactcagactgtct
gggaaaagactaaaggaacaggaagaaaccagtagcaaaaatcctactagatcaccagta
actgaaataagaactcaccttttaagtctgacgtctgaacttccagattctccagaacca
gttacagaaactaatgaagacagtatattcattccaccaactgcccaaccagaaaaaggt
gtggatacactcctaagaagacctgatttcaccagggcgactacagttcctttacagact
ccaacagatagcagtagtagtcagcaccttgaacacattcctcccaaaggcagcagtgaa
cttactactcacggcctaaaaaacattagatttacttcacctgtaagtttggaggcacaa
ggcaaaaaagtgactatccctacagataacctcgttgtaaacaaagctgtaagtaaaagt
ggccaactgcccacaagttctaatttagaggcagatatttcatgttctctaaatgaactc
actcacaataacttgccagcaaatgaaaatcaaaacttagaacaaaatcaaacagagaaa
tctttaaaatctcccactgacgctcttgatggtagaaatgaaaatcttcaggaaaatgag
attctaagtcaacctaagagtcttagcctggaagcaacctctcttctttctgcagaaaaa
cattcttgcacaatgcttgaaggccttctgtttcctgcagaatactatgttagaacaaca
cgaagcatgtccaattgccagagaaaagtagccctggaggctgtcattcagagtcatttg
gatgtcaagaaaaaagggtttaaaaataaaaataaggatgcaagtaaaaatgtaaacctt
tccaatgaggaacctgaccaaagtgaaattaggatgtctgacacatgcacaggacaacca
agttcaagaacttctcagaaacttctctcattaactaaagtcagctctcccgctgggccc
actgaagataatgacttgtctaggaaggcagttgcccaggcacctagtagaagatacaga
ggaaaaagaaaatcagcctgcaccccagcatcagatcattgtgaaccacttttgccagct
tgcaacccatcagttattaacaggtccaaggaggaagtcacctcacataaatatcagaac
aaaaaagcagttattcgagtgaaagggaagaaaagtcatcaaaaagaggattccctttct
tggagtaatagtgcttatttatccttggatgatgatgctttcacggcttcatttcataag
gatggaatgctgagcttaaagcaactactgtcttttctcagcatcacagactttcagtta
cctgatgaagactttggacctcttaagcttgaaaaactgaagtcttgctcagaaaaacca
gtggagccctttgaatcaaacatgtttggagagagacatcttaaagagggaaattgtatt
tttccagaggaactgagtcctaaacgcatggatacagaaatggaggacttagaagaggac
cttattgttctaccaggaaaatcacatcccaaaaggccaaacccacaaagccagcataca
aagacaggcctttcttcatccatattactttatactcctttaaatacagttgcgcttgat
gataatgacaggcctgctacagacatgtgttcacctcttttccccatcttaggtactact
ccagcctttggccctcatggctcctatgaaaaagcttccacagaggtcgctggacaaact
tgccgcacaccccaacttgctcatttgaaagactcagtctgtcttgccagtgatagtaaa
caattcgacagttcaagcagtccagcaaaaccacataccaccctgcaggtgtcaggcagg
caaggacaacctacctgtgactgtgactctgccctgccaggaacacctccacccattgag
tcattcacttttaaagaaaatcagctctgtggaaacacatgccaggggttgcataaacat
tccgtcgaacagactgaaacagcagagcttcctgcttctgatagcgtaaacccaggcaac
ctacaattggtttcaaagttaaagaatccttcaggttcctgttccgtagatgtgagtgcc
atgttttgggaaagagccggttgtaaagagccatgtatcataactgcttgcgaggatgta
gtttctctttggaaagctctggatgcttggcagtgggaaaaactttatacttggcacttc
acagaggttccagtattacagatagttccagtgcctgatgtgtataatcttgtgtgtgta
gctttgggaaatttggaaatcagagagatcagggcattgctttgttcctctgatgatgaa
agtgaaaagcaagtactactgaagtctggaaatataaaagctgtgcttggcctgacaaag
aggaggctagttactagcagtgggaccctttctgatcaacaagtagaagtcatgacattt
gcagaagatggaggaggcaaagaaaaccaatttttgatgccccctgaggagactatatta
acttttgccgaggtccaagggatgcaagaagctctccttggtactactgttatgaacaac
attgttatttggaatttaaaaactggtcaactcttgaaaaagatgcacattgatgattct
taccaagcttcagtctgtcacaaagcctattctgaaatggggcttctgtttattgtcctg
agtcatccctgtgccaaagagagtgagtcgttgcaaagccctgtgtttcagctgattgtg
attaaccctaagacgactctcagtgtgggtgtgatgctgtactgtcttcctccagggcag
gctggcaggttcctggaaggtgacgtgaaagatcattgtgcagcagcaatcttgacttct
ggaacaattgccatttgggacttacttctcggtcagtgtactgccctcctcccacctatc
tctgaccaacgttggtcttttgtgaagtggtcaggtacagactctcatttgctggctgga
caaaaagatggaaatatatttgtataccactactcataa
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