Theropithecus gelada (gelada): 112615476
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Entry
112615476 CDS
T08041
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04151
PI3K-Akt signaling pathway
tge04382
Cornified envelope formation
tge04510
Focal adhesion
tge04512
ECM-receptor interaction
tge04820
Cytoskeleton in muscle cells
tge04926
Relaxin signaling pathway
tge04933
AGE-RAGE signaling pathway in diabetic complications
tge04974
Protein digestion and absorption
tge05146
Amoebiasis
tge05165
Human papillomavirus infection
tge05200
Pathways in cancer
tge05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112615476 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112615476 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112615476 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112615476 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112615476 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
112615476 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
112615476 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112615476 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
112615476 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112615476 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
112615476 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112615476 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tge04147
]
112615476 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
tge00536
]
112615476 (COL4A6)
Exosome [BR:
tge04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112615476 (COL4A6)
Glycosaminoglycan binding proteins [BR:
tge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112615476 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112615476
NCBI-ProteinID:
XP_025227959
Ensembl:
ENSTGEG00000015553
UniProt:
A0A8D2FD45
LinkDB
All DBs
Position
X:complement(106167864..106460108)
Genome browser
AA seq
1705 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPS
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDG
ITGPQGAPGSPGAVGPVGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKTGTLGFPGLNGFQGIEGEKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVLGALGPQGFPGLKGDQGSPGRTTIGAAG
LPGRDGLPGPPGPPGPPGPEFEAETLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGSPGPSGPKGK
KGEPILSTISGMPGDRGDSGSQGFPGVIGKPGNDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGPPGSKGDCCCREKVGKGD
LDTERGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGNKGKPGSPGLVH
LPELPGFPGPRGEKGLPGFPGLPGKDGLPGTIGSPGLPGSKGATGDIFGAENGAPGEQGL
QGLTGDKGLLGDSGLPGLKGVYGKPGLLGPKGERGSPGTPGPVGQPGTPGSSGPYGIKGK
SGLPGAPGFPGTSGHPGKKGTRGEKGPPGSIVKKGLPGLKGLPGNPGLIGLKGSPGSPGV
AGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGHAGTPGEKGD
RGNPGPVGIPGPRRPMSNLWLKGDKGSQGSAGSDGFPGPRGDKGEAGQPGPPGLPGAPGL
PGTIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSSGLPGTSGLPG
LKGDNGQTLEISGSPGPKGQPGESGFKGTKGRDGPIGNIGFPGNKGEDGKVGVSGDVGLH
GAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTH
GTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAP
GISLPSLIAGQPGDPGRPGLDGERGRPGPPGPPGPTGPSSNQGNTGDPGFPGIPGPKGPK
GDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAP
GQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGP
PGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPGQSARVGYTLVKHSQSEQVPLCPIGM
SQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLS
TTAPIPMMPVSQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMH
TAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEL
PVSETLKAGQLHTRVSRCQVCMKSL
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgacggaggaactggcagga
gcgggagagaagtcttatggaaagccgtgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagagggcgacctggaccaattggaattcaaggcccatca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggacccaaaggagataagggtcccatgggagttcctgga
tttcttggcatcaatgggattccgggccatcctggacagccgggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgtcggatttccaggccctgatggctat
cctgggcttctcggaccacctgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagcacccggatctcctggagctgtaggacctgtaggaccacca
ggattacaaggtcctccagggcctcctggtcctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggaactactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagacagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtgaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagaccct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccagggcctgcgtggcccg
tctggtgtccctggcttgccagcattatcaggtgtcctaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaagcccaggccgtaccacaattggagcagctggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctggtccagaa
tttgaggccgaaactctacacaacaaagagccagggttccctggtctccgaggagaacaa
ggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccacggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggtctccgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacaatctcaggaatgccaggggatcggggtgattctggc
tcccagggcttccctggtgtaataggaaaaccaggcaacgatggagtaccaggtctacca
ggtctgccaggacttccgggtgatggtgggcagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccgggaattgggttacca
ggactgcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccctcctggatctaagggtgactgctgctgcagagagaaggttggtaaaggagac
ttagacacagagagaggaatcaccctgccgtgtattattcctgggtcatacggtccatca
ggatttccaggcactcccggattcccaggccctaaagggtcccgaggcctccctgggacc
ccaggtcagcctggatcaagtggaaataaaggaaagccagggagtccaggattggttcat
cttcctgaattaccaggatttcctggacctcgtggggagaagggcttgcctgggtttcct
gggctccctggaaaagatggcttgcctgggacgattggcagtccaggtttacctggttcc
aagggagccactggtgacatctttggtgctgaaaatggtgctccgggggaacaaggccta
caaggattaacaggcgacaaaggacttcttggagactctggccttccaggactcaagggt
gtgtacgggaagcctggcttgctaggccccaaaggtgagcggggcagccctggaacacca
ggaccggtgggacagccaggcaccccaggatctagtggtccttatggcatcaagggcaaa
tctgggctcccaggagcaccaggctttccaggcacctcagggcatcctggaaagaaagga
acaagaggcgagaaaggccctcctggatcaattgtaaagaaagggctgccagggctaaaa
ggccttcctggaaatccaggcctaatagggctgaaaggaagcccaggctctccaggggtc
gctgggttgccagccctctctggacccaagggagagaaggggtctgttggattcgtaggt
tttccaggaataccaggtctgcctggtattcctggaacaagaggattaaagggaattcca
ggatcaaccggaaaaatgggaccatctggacacgctggcactcctggtgaaaagggagac
agaggcaatccggggccagtcggaatacctggtccaagacgtccaatgtcaaacctttgg
ctcaaaggagacaaaggctctcaaggctcagccggatctgatggatttccagggccaaga
ggtgacaaaggagaggctggtcaacctgggccaccaggcctgcctggagctcctggcctc
ccaggcactatcaaaggagttagtggaaagccaggtccccctggcttcatgggaatccgg
ggcttacctggcctgaaggggtcctctggaataacaggtttcccaggaatgccaggagaa
agtggttcacaaggtatcagagggtcgtctggactcccaggaacatctggtctcccaggc
ctgaaaggagacaacggccagacacttgaaatttccggtagcccaggaccgaagggacaa
cctggtgaatctggttttaaaggcacaaaaggaagagatggaccaataggcaatataggc
ttccctggaaacaaaggtgaagatggaaaagttggtgtttctggagatgttggccttcat
ggagctccagggtttccaggggttgccggcatgagaggagaaccaggacttccaggctct
tctggtcatcaaggggcaattgggcccctaggaccccccggattaataggacccaaaggc
ttccctggatttcctggtttacatggactgaatgggcttccgggcaccaagggtacccat
ggcactccaggacctagtatcactggtgtgcctgggcctgctggtctccctggacccaaa
ggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctgagaggg
caaaaaggtgatcgaggtttcccaggtctccagggccctgctggtctccccggtgcccca
ggcatctccttgccctcactcatagcaggacagcctggtgaccctgggcgaccaggccta
gatggagaacgaggccgcccaggcccccctggacctccaggtcccactgggccatcctcg
aatcaaggcaacaccggagaccctggcttccctggaattcctggacctaaagggcctaag
ggagaccaaggaattccaggtttttctggccttcctggagagctaggactgaaagggatg
agaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagacccagga
tttcccgggatgaaggggaaggcagggccaagaggctcttctggcccccaaggtgctcct
ggacaaacaccaactgcagaagctgtccaggttcctcctggacccttgggtctaccaggg
atcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggcctacaa
ggctccaaaggtttacctggcatccccggcaaagatggtcccagtgggctcccaggccca
cctggggctcttggtgatcctggtctgcctggactgcaaggccctccaggatttgaagga
gctccagggcagcaaggccccttcgggatgcctggaatgcctggccagagcgcgagagtg
ggctacacgttggtaaagcacagccagtcggaacaggtgcccctgtgtcccatcgggatg
agccagctatgggtggggtacagcttactgttcgtggaggggcaagagaaagcccataac
caggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttcatctac
tgcaatatcaacgaggtgtgccactatgccaggcgcaatgataaatcctactggctctcc
actactgcccctatccccatgatgcccgtcagccagacccagattccccagtatatcagc
cgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggacatcacc
atcccgcagtgccccctgggctggcgcagcctctggattgggtactccttcctcatgcac
actgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgcctagag
gactttcgggccacccctttcattgagtgcagtggtgcccgaggcacctgccactacttt
gcaaacaaatacagtttctggttgaccacagtggaggagaggcagcagtttggggagttg
cctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagtcgctgccaggtg
tgtatgaaaagcctgtag
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