Theropithecus gelada (gelada): 112617412
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Entry
112617412 CDS
T08041
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04382
Cornified envelope formation
tge04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112617412 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
112617412 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Interfer-bind
Fndc10
Motif
Other DBs
NCBI-GeneID:
112617412
NCBI-ProteinID:
XP_025229966
LinkDB
All DBs
Position
2:91603492..91635595
Genome browser
AA seq
2943 aa
AA seq
DB search
MRLRLLVAALCAGILAGAPRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRSNFREVRSF
LEGLVLPFSGAASAQGVRFATVQYSDDPRTEFSLDALGSGGDVIRAIRELSYKGGNTRTG
AAILHVADRVFLPQLARPGVPKVCILITDGKSQDLVDTAAQKLKGQGVKLFAVGIKNADP
EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTRPLDDSTSAPRDLVL
SEPSSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNIPAGETSVWLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVSGATGYRVTW
RVLSGGPTQQQELGPGQGSVLLRDLEPGTDYEVTMSTLFGHSVGPTASLTARTDASVEQT
LRPVILGPTSILLSWNLVPEARGYRLEWRRETGLEPPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPTGPELPVGPVMDLQATELPGQRVRVSWSPVPGATQYRII
VRSTQGVERILMLPGSQTAFDLDDVQAGLSYTVRVSARVGSRESSASVLTVRREPETLLA
VPGLQVVVSDATRVRVAWGPVPQASGFRISWSTGSGPESSQTLPPDSTVTDITGLQPGTA
YQVAVSVLRGREEGPAAVIVARTDPLGPVRTVHVTQASSSSVIITWTRVPGATGYRVSWH
SAHGPEKSQLVSGEATVAELDGLEPDTEYTVHVRAHVAGVDGPPASVVVRTAPEPVGRVS
RLQILNASSDILRITWVGVTGATAYRLAWGRSEGGPMRHQILPGNTDSAEIRGLEGGVSY
SVRVTALVGDREGTPVSIVVTTPPEAPPALGTLHVVQRGEHSLRLRWEPVPGVQGFLLRW
QPEGGQEQSRVLGPELNSYHLDGLEPATQYRVRLSVLGPAGEGPSADVTARTESPRVPST
ELRVVDTSIDSVTLAWTPVSRASSYILSWRPLRGPGQVPGAPQTLPGISSSQRVTGLEPG
VSYIFSLTPVLDGVQGPEASITQAPVCPRGLADVVFLPHATQDNAHRAEATRRVLERLVL
ALGPLGPQAVQVGLLSYSHRPSPLFPLNGSYDLGIILQRIRDMPYMDPSGNNLGTAVVTA
HRYVLAPDAPGRRQHVPGVMVLLVDEPLRGDIFSPIREAQAAGLKVVMLGMAGADPEQLR
RLVPGMDSVQTFFAVDDGPSLDRAVSGLAAALCQASFTTQPRPEPCPVYCPKGQKGEPGE
MGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRPGTPGTPGA
PGLKGSPGLPGPRGEPGEQGSRGPKGEPGAPGQITGGEGPGLPGRKGDPGPSGPPGPRGP
LGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPIGPP
GEKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPG
PAGSRGLPGVAGRPGAEGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGP
AGPRGATGVQGERGAPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRP
GPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGNQGDPGAD
GQNGSPGPSGSKGDRGEPGPPGLPGRLVDIGPGAREKGEPGDRGQEGPRGPKGDPGLPGA
PGDRGIDGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASGPPGLNGAAGK
AGDPGRDGLPGLRGEQGPPGPSGSPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGD
SGAPGREGRDGPKGERGVPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSK
GEQGLPGERGLRGEPGSVPNVDRLLETAGIKVSALREIVETWDESSGSFLPVPERRRGPK
GDPGERGSPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGI
PGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGSPGLPGPPGPKVSVDGPGP
ALSGEQGPPGLKGAKGEPGSDGDRGPKGDRGVPGIKGDRGEPGPRGQDGNLGLPGERGVA
GPEGKPGLQGPRGPPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPG
PTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGAGGKDGDRGSPGVPGSPG
LPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEK
GEAGRAGEPGDPGEDGQKGAPGPKGFKGDAGVGVPGSPGLPGPPGVKGDLGLPGPPGAPG
VVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGVPGPLGPPGPPGSVGPPGASGLKGDKG
DPGAGLPGPRGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGTAGLKGDKGD
SAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDSGDPGDKGSKGEPGDKGSAGSPGLRG
LPGPQGQPGAAGIPGDPGSPGKDGVPGIRGGKGDVGFMGPRGLKGERGVKGACGLDGEKG
DKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKG
ERGTPGIGGFPGPRGSDGSAGSPGPPGGVGPRGPEGLQGQKGERGPPGERVVGAPGAPGA
PGERGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAA
DTAGSQLHAVPVLRVSHAEEEERVPPEDDEYSEYSEYSVEEYQDPEAPWDSDDPCSLPLD
EGSCTAYTLRWYHRAVPGSTEACHPFVYGGCGGNANRFGTREACERRCPPRVAQSQGIGA
TQD
NT seq
8832 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggcttctggtggccgcgctctgcgccgggatcctggcaggggcgccccga
gtgcgagcccagcacagggagagagtgacctgcacgcgcctttacgccgctgacattgtg
ttcttactggatggctcctcatccattggccgcagcaatttccgcgaggtccgcagcttt
ctcgaagggctggtgctgcctttctctggagcagccagtgcacagggtgtgcgctttgcc
acagtgcagtacagtgatgacccacggacagagttcagcctggatgcacttggctctggg
ggtgatgtgatccgcgccatccgtgagctcagctacaaagggggcaacactcgcacaggg
gctgcaattctccatgtggctgaccgtgtcttcctgccccagctggcccgacctggtgtc
cccaaggtctgcatcctgatcacagatgggaagtcccaggacctggtggacacagctgcc
caaaagctgaaggggcagggggtcaagctgtttgctgtggggatcaagaatgccgaccct
gaggagctgaagcgagttgcctcacagcccaccagtgacttcttcttcttcgtcaatgac
ttcagcatcttgaggacactactccccctcgtttcccggagagtgtgcacaactgctggt
ggcgtgcctgtgacccggcctctggatgactcaacctctgctccacgagacctggtgctg
tctgagccaagcagccaatccttgagagtacagtggacagcggccagtggccctgtgact
ggctacaaggtccagtatactcctctgacggggctgggacagccactgccgagcgagcgg
caggaggtgaacatcccagctggtgagaccagcgtgtggctgcagggtctccggccactg
actgagtaccaagtgactgtggttgccctctacgccaacagcatcggggaggcagtgagc
gggacagctcggaccactgccctggaggggccggaactgaccatccagaataccacagcc
cacagcctcctggtggcctggcggagtgtgtcaggtgccactggctaccgtgtgacatgg
cgggtcctcagtggtgggcccacacagcagcaggagctgggccctgggcaaggttcagtg
ttgctgcgcgacttggagcctggcacagactatgaggtgaccatgagcaccctgtttggc
catagtgtggggcccaccgcttccctgacggctcgcactgatgcttctgttgagcagacc
ctgcgcccggtcatcctgggccccacatccatcctcctttcctggaacttggtgcctgag
gcccgtggctaccggttggaatggcggcgtgagactggcttggagccaccacagaaggtg
gtgctgccctctgatgtgacccgctaccagttggatgggctgcagccgggcacagagtac
cgcctcacactctacactctgctggagggccgcgaggtggccacccctgcaaccgtggtt
cccactggaccagagctgcccgtgggccctgtgatggacctgcaagccaccgagctgccc
gggcagcgggtgcgagtgtcctggagcccagtccccggtgccacccagtaccgcatcatt
gtgcgcagcacccagggggttgagcggatcctgatgcttcccgggagtcagacagcgttc
gacttggatgacgttcaggctgggcttagctacactgtgcgggtgtctgctcgagtgggt
tcccgtgagagcagtgccagtgtcctcactgtccgccgggagccggaaaccctacttgct
gttccagggctgcaggttgtagtgtcagatgctacgagagtgagggtggcctggggaccc
gtccctcaagccagtggatttcggattagctggagcacaggcagtggtccagagtccagc
cagacactgcccccagactctactgtcacagacatcacagggctgcagcctggaaccgcc
taccaggtggctgtgtctgtactgcgagggagagaggagggccccgctgcggtcatcgtg
gctcgaacagacccactgggcccagtgaggacagtccatgtgactcaggccagcagctca
tctgtcatcattacctggaccagggttcctggcgccacaggatacagggtttcctggcac
tcagcccatggcccagagaaatcccagttggtttctggggaggccacggtggctgagctg
gacgggctggagccagatactgagtatacggtgcatgtaagggcccatgtggctggtgtg
gatgggccccctgcctctgtggttgtcaggactgcccctgagcctgtgggccgtgtgtca
aggctgcaaatcctcaatgcttccagcgacattctgcggatcacctgggtaggggtcact
ggggccacagcttacagactggcctggggccggagtgaaggtggccccatgagacaccag
atactcccaggaaacacagactctgcagagatccggggtctcgaaggtggagtcagctac
tcagtgcgagtgactgcacttgtcggggaccgcgagggcacacctgtctccattgtcgtc
accacgccacctgaggctccgccagccctggggacgcttcacgtggtgcagcgcggggag
cactcgctgaggctgcgctgggagccggtgcccggagtgcagggcttccttctgcgctgg
caaccagagggtggccaagaacagtcccgggtactggggcccgagctcaacagctatcac
ctggacgggctggagccagccacacagtaccgcgtgaggctgagtgtcctagggccggct
ggagaaggaccctctgcagacgtgactgcgcgcactgagtcacctcgtgttccaagcact
gaactacgtgtggtggacacctcgatcgactcggtgactttggcctggaccccagtgtcc
agggcatccagctacatcctatcctggcggccactcagaggccctggccaggtgcctggg
gccccgcagacacttccagggatctcaagctcacagcgggtgacagggctagagcctggc
gtctcttacatattctccctgacgcctgtcctggatggcgtgcagggtcctgaggcatcc
atcacacaggcgccagtgtgtccccgtggcctggcggatgtggtgttcctaccacacgcc
actcaagacaatgctcaccgtgcggaggctacgaggcgggtcctggagcgtctggtgttg
gcacttgggcctcttgggccacaggcggttcaggttggcctgctgtcttacagtcaccgg
ccctccccactgttccccctgaatggctcctatgaccttggcattatcttgcaaaggatc
cgtgacatgccctacatggacccaagtgggaacaacctgggcacagccgtggtcacagct
cacagatacgtgttggcaccagatgctcctgggcgccgccagcacgtgccaggggtgatg
gttctgctagtggatgaacccttgagaggtgacatattcagccccatccgtgaggcccag
gctgctgggcttaaagtggtgatgttgggaatggctggagcggacccagagcagctgcgt
cgcttggtgccgggcatggactctgtccagacctttttcgccgtggatgatgggccaagc
ctggaccgggcagtcagtggtctggctgcagccctgtgtcaggcatccttcactactcag
ccccggccagaaccctgcccagtatattgtccaaagggccagaagggggaacctggagaa
atgggcctgagaggacaagttgggcctcctggcgaccctggcctcccgggcaggactggt
gctcctggcccccaggggccccctggaagtgccactgctaagggcgaaaggggcttccct
ggagcagatgggcgtccaggcagccctggccgccccgggactcctgggacccctggagcc
cctggcctaaagggctctccagggttgcctggccctcgtggggaaccgggagagcaagga
tctcgaggcccaaagggggagccgggggctcccggacaaatcactggaggcgaaggacct
gggcttcctgggcggaaaggggaccctggaccatcgggcccccctggacctcgtggacca
ctgggggacccaggaccccgtggccccccagggcttcctggaacagccatgaagggtgac
aaaggtgatcgtggggagcggggtccccctggaccaggtgaaggtggcattgctcccggg
gagcccggtctgccaggtcttcccggaagccctggaccccaaggccccattggcccccct
ggagagaaaggagaaaaaggtgactctgaggatggagctccaggcctcccaggacaacct
gggtctccgggtgagcaaggcccacggggacctcctggagctattggccccaaaggtgac
cggggctttccagggcccctgggtgaggctggagagaagggcgaacgtggacccccaggc
ccagcgggatcccgggggctgccaggggttgctggacgtcctggagcagagggtcctgaa
gggccaccaggacccaccggccgccaaggagagaagggggagcctggtcgtcctggggac
cctgcagtggtgggacctgctgttgctggacccaaaggagaaaagggagatgtggggcct
gctgggcccagaggagctactggagtccaaggggaacggggcgcacctggcttggttctt
cctggagaccctggccccaagggagaccctggagaccggggtcccattggccttactggc
agagcaggacccccaggtgactcagggcctcctggagagaagggagaccctgggcggcct
ggccccccaggacctgttggcccccgaggacgagatggtgaagttggagagaaaggtgac
gagggtcctccgggtgacccaggtttgcctggaaaagcaggcgagcgtggccttcggggg
gcacctggagttcgggggcctgtgggtgagaagggaaaccagggagatcctggagcggat
ggacaaaatggcagccctggaccatctggatccaagggtgaccgtggggagccgggtccc
ccaggactcccgggacggctggtagacataggacctggagcaagagagaagggagagcct
ggggaccgcggacaagagggtcctcgagggcccaagggcgaccctggcctccctggagcc
cctggggataggggcatagatgggcttcgcgggcccccaggcccacagggggacccaggt
gtccgaggcccagcaggagaaaagggtgaccggggtccccctgggctggatggccggagc
ggactggatgggaaaccaggagcctccgggccccctgggctgaatggtgctgcaggcaaa
gctggggacccagggagagacgggcttccaggcctccgtggagaacagggcccccctggc
ccctctggttcccctggattaccgggaaagccaggcgaggatggcaaacctggcctgaat
ggaaaaaacggagaacctggggaccctggagaagacgggaggaagggagagaaaggagat
tcaggtgcccctgggagagaaggtcgtgatggccccaagggtgagcgtggcgttcctggt
atccttggaccccagggccctccaggcctcccagggccagtgggccctcctggccagggt
tttcctggtgttccaggaggcacgggccccaagggtgaccgtggggagactggatccaaa
ggggagcagggcctccctggagagcgtggcctgcgaggagagcctggaagtgtgccgaac
gtggatcggttgctggaaactgctggcatcaaggtgtctgccctgcgggagatcgtggag
acctgggacgagagctctggtagcttcctgcctgtgcccgaacggcgtcgaggccccaag
ggggacccaggcgagcggggctccccaggcaaggagggccccatcggctttcctggagaa
cgcgggctgaagggagaccgtggagaccctggccctcaggggccacctggcctggccctt
ggggagaggggcccccctggacctcccggccttgccggggagcctggaaagcctggtatt
cccgggctcccaggcagggctgggggtgtgggagaggcaggaaggccaggagagagggga
gaacggggagagaaaggagaacgtggagaacagggcagagatggccctcctggcctccct
ggatcccctgggctccctggaccccctggccccaaggtgtctgtggatgggccaggtcct
gcactctctggagaacagggaccccctggactcaagggtgctaagggggagccaggcagc
gatggtgaccgaggtcccaaaggagacaggggtgtgccaggcatcaaaggagaccgggga
gagcctggaccgaggggccaggatggcaacctgggtctaccgggagagcgtggtgtggct
gggcctgaagggaagccgggtctgcagggtccaagaggaccccctggcccagcgggtggt
catggagaccctggaccacctggtgccccgggtcttgctggccctgcaggaccccaggga
ccctctggcctgaagggggagcctggagagacaggaccccctggacggggcctgcctgga
cctactggagctgtgggacttcctggtccccccgggccttcgggccttgtgggtccacag
gggtctccaggtttgcctggacaagtgggggagacagggaagccgggagccccaggtcga
gatggtgccggtggaaaagatggagacagagggagccccggtgtgccaggatcaccaggt
ctgcccggccctgtcggacctaaaggagagcctggccccacgggggcccctggacaggct
gtggtcgggctccctggagcaaagggagagaagggagcccctggaggccttgctggagac
ctggtgggtgagccgggagccaaaggtgaccgaggactgccagggccgcgaggcgagaag
ggtgaagctggccgtgcaggggagcccggagaccctggggaagatggtcagaaaggggct
ccaggacccaaaggtttcaagggtgacgcaggagttggggtcccaggctcccctgggctg
cctggccctccaggtgtgaagggagatctgggcctccctggcccccctggtgctcctggt
gttgttgggttcccgggtcagacaggccctcgaggagagatgggtcagccaggccctagc
ggagagcggggtctggcaggccccccagggagagaaggagttccaggccccttggggcca
cctggaccaccggggtcagtgggaccacctggggcctctggactcaaaggagacaaggga
gaccctggagcagggctgcccgggccccgaggcgagcgtggggagccaggcgtccggggt
gaagatggccgccctggccaggagggaccccgaggactcacggggccccctggcagcagg
ggagagcgtggggagaagggtgatgttgggactgcaggactaaagggcgacaagggagac
tccgctgtgatcctggggcctccagggccacggggtgccaagggggacatgggcgaacga
gggcctcggggcttggatggtgacaaaggacctcggggagatagtggggaccctggtgac
aagggcagcaagggagagcctggtgacaaaggctcagctgggtcgccaggactgcgtgga
ctcccaggaccccagggtcaacctggtgcagcagggatccctggtgacccgggctcccca
ggaaaggatggagtgcctggcattcgaggaggaaaaggagatgttggcttcatgggtccc
cggggcctcaagggtgaacggggagtgaagggagcctgtggccttgatggagagaaggga
gacaagggagaagctggtcccccaggccgccctgggctggcaggacacaaaggagagatg
ggggagcctggtgtgccgggccagtcgggggcccctggcaaggagggcctgatcggtccc
aagggtgaccgaggctttgatgggcagccaggccccaagggtgaccagggcgagaaaggg
gaacggggaaccccaggaattgggggcttcccaggccccaggggcagtgatggctctgct
ggttccccggggccacctggcggtgttggtcccagaggccctgaaggacttcagggccag
aagggtgagcgaggtccccctggagagagagtggtgggggctcctggggcccctggagcc
cctggcgagagaggggagcaggggcggccagggcctgctggcccccgaggcgagaaggga
gaagctgcactgacggaggatgacatccggggctttgtgcgccaggagatgagtcagcac
tgcgcctgccagggccagttcatcgcatccggatcacgacccctccctagttatgctgca
gacactgctggctcccagctccatgctgtgcctgtgctccgcgtctctcatgcagaggag
gaagagcgggtgccccctgaggatgatgagtactccgaatactccgagtattccgtggag
gagtaccaggaccctgaagccccttgggatagcgatgacccctgttccctgccgctggat
gagggctcctgtactgcctacaccctgcgctggtaccatcgggctgtaccaggcagcaca
gaggcctgtcacccttttgtctatggcggctgtggagggaatgccaaccgttttgggacc
cgtgaggcctgtgagcgccgctgcccaccccgagtggcccagagccaggggataggtgct
acccaggactga
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