Theropithecus gelada (gelada): 112618936
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Entry
112618936 CDS
T08041
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
tge
Theropithecus gelada (gelada)
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tge04040
]
112618936 (SCN11A)
Ion channels [BR:
tge04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112618936 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
112618936
NCBI-ProteinID:
XP_025232383
Ensembl:
ENSTGEG00000017297
LinkDB
All DBs
Position
2:101295154..101512324
Genome browser
AA seq
1790 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKDKSKDKTGEVPHLRPQLDLKASR
KLPNLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIPEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSCIPGITIKLSSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISRDCKNISNLEAYDHC
FEKKENSTEFKMCGIWKVNSSCSKQYECNHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLHTAGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPQKRKLFGNKKRKSFFLRESGKGQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHRDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPLWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEPSFEKMLNTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVMNIF
QNTSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ
LFGHRFNSQKSAKLCNPTGPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEVN
ASSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGQARKTKVQLALDRFRR
AFCFVRHTLEHFCHKWCRKQKLPKQKEVTGGCAAQSKDIIPLVTEMKRGSETQEELGILT
SVPKTLGIRHDWTWLAPLAEEEDDAEFSGEDNAQPITQPEAEQQAYELHQENKKPTSQGV
QNVEIDMFPEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGLLPEMVPEKQPERCLPK
GFGCCFPCCSMDKRKPHWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFENVHLK
DQPKIQELLNCTDIIFTHIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIVSVTTLINLK
ELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFS
GKFGKCINGTESVINYTIIANKSQCESGNFSWINQKVNFDNVGNAYLALLQVATFKGWMD
IIYAAVDSREKEQQPEFESNSLGYIYFVVFIVFGSFFTLNLFIGVIIDNFNQQQKKISGQ
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDVVTSQIFDIIIISLIILNMI
SMMAESYDQSKAVKSTLDHLNWVFVVIFTLECLIKIFALRQYYFTNGWNLFDSVVVLISI
VSTMISTLESQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIG
LLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFSGSMLCLFQISTSAGWDSLLSPML
RSKESCNSSSENCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGED
DFDIFYEVWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLH
CMDILFAFTARVLGGSDGLDSMKAMMEEKFMETNPLKKLYEPIVTTTKRKEEERCAAVIQ
KAFRKYMMKVTKGDQGDQSDLENRSHSPLQTLCNGDLPSFGVVKGKVHYD
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaagataagtct
aaagacaagacaggagaagtaccccatcttcggcctcagcttgacctaaaggcctccagg
aagttgcccaatctctatggcgacattcctcgtgagctcataggaaagcccctggaagac
ctggacccattctacagaaatcataagacatttatggtgttaaacaaaaagaggacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattgttcagcatgttcataatcggcactgttatc
atcaactgcgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
atcccagagtatgtcttcactgggatttatatttttgaagctttgattaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattggaatagcgattgtgtcatgtattccaggaatcaccatcaaactgtcgtcc
ctgcgtaccttccgtgtgttcagagctttaaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaatgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagcctgaac
ctgaaatgcatctcgagggactgtaaaaatatcagtaacctggaagcttatgaccattgc
tttgaaaagaaagaaaattcgactgaattcaaaatgtgtggcatctggaaggttaacagt
tcctgttccaaacaatatgaatgtaaccacaccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaagctttatcaacagaccctgcatactgctggactctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaaccctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcagagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttccctcgaaacatcatattttaccccccaaaagagaaagctc
tttggtaataagaaaaggaagtccttctttttgagagagtctgggaaaggccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagagcaaaccaaacga
ctgtcccagaatctatcactggaccactttgacgagcatagagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgcggggaaaacctggcatccaaatacctcgtgtggaactgctgc
cccctgtggctgtgcattaagaaggtcctgagaactgtgatgactgatccatttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggagcccagttttgagaaaatgttgaatacagggaatttggttttcactggcattttt
atggcagaaatgtgcctaaaaatcattgctctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtaatgaacatcttt
caaaatacaagctggccattcttgcgttccttcagagtgctcagggtcttcaagttagcc
aaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagccctt
ggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatgcag
ctttttggccataggttcaattctcaaaagagtgcaaaactctgtaacccgacaggcccg
acagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtggtg
ttccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaggaagtgaat
gcatcgtcatcattgtgtgttattgtcttcatattgatcacggtgataggaaaacttgtg
gtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaagaaatgga
aacttagaaggacaggccaggaaaactaaagtccagttagcactggatcgattccgccgg
gctttttgtttcgtgagacacactcttgagcatttctgtcacaagtggtgcaggaagcaa
aagttgccgaagcaaaaagaggtgacaggaggctgtgctgcacaaagcaaagatatcatt
cccctggtcacagagatgaaaaggggctcagagacccaggaggagcttggtatactaacc
tctgtaccaaagaccttgggcatcaggcatgactggacttggttggcgccacttgcagag
gaggaagatgatgctgaattttctggtgaagataatgcacagcccatcacacaacctgag
gcagaacaacaggcctatgagctccatcaggagaacaagaaacccaccagccagggagtt
caaaatgtggaaattgacatgttccctgaagatgagcctcatctgaccatacaggatccc
cgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatcttcaggat
ggctttggattgttacctgagatggttcccgaaaagcaaccagagagatgtttgcccaaa
ggctttggttgctgctttccatgctgtagcatggacaagagaaagcctcactgggtcatt
tggtggaacctgaggaaaacctgctaccaaatagtgaaacacagctggtttgagagcttt
attatctttgtgattctgctgagcagtggggccctgatatttgaaaatgttcaccttaag
gaccaacccaaaatccaagaattactaaattgtactgacattatttttacacatattttt
atcctggagatggtactaaaatgggtagcctttggatttggaaagtatttcaccagtgcc
tggtgctgccttgatttcatcattgtgattgtctctgtgaccaccctcattaacttaaag
gaattgaagtccttccgaactctgcgagcactgaggcctcttcgtgcgctgtcccagttt
gaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctgaatgtt
ttgcttgtctgcctcattttctggctcatattttgtattctgggagtacacttcttttct
ggaaaatttgggaaatgcattaatggaacagagtcagttataaattataccatcattgca
aataaaagtcaatgtgaaagtggcaatttctcttggatcaaccagaaagtcaactttgac
aatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctggatggat
attatatatgcagctgttgattccagagagaaagaacagcagccagagtttgagagcaat
tcactcggttacatttacttcgtagtttttatcgtctttggctcattcttcactctgaat
ctcttcattggtgttattattgacaacttcaaccaacagcagaaaaagataagtggccaa
gacatttttatgacggaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcaaaaacctattccacggcctctgaacaaatgtcaaggtcttgtgttcgac
gtagtcacaagccagatctttgacatcatcatcataagtctcattatcctaaacatgatt
agcatgatggctgaatcatacgaccaatccaaagccgtgaaatccacgcttgaccatctc
aactgggtctttgtggtcatctttacattagaatgtctcatcaaaatcttcgctttgagg
caatactacttcaccaatggctggaatttatttgactctgtggtcgtgcttatttctatt
gttagtacaatgatttctaccttggaaagtcaggagtacattcctttccctccgacgctc
ttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgggctgcacga
ggaatcaggactctcctctttgctctgatgatgtcactcccttctctgttcaacattggt
cttctactctttctgattatgtttatctatgccattttgggtatgaactggttttccaaa
gtgaatccagagtctggaattgatgatatattcaacttcaagactttttccggaagcatg
ctgtgtctcttccagataagcacatcagcaggttgggattccctgctcagccccatgctg
cgatcaaaagaatcatgtaactcctcctcagaaaactgccacctccctggcatagccaca
tcctactttgtcagttacattatcatctcctttctcattgttgtcaacatgtacattgct
gtgattttagagaacttcaatacagccactgaagaaagtgaggaccctttgggcgaagat
gactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaatttatt
gaatattctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtggcaaag
ccaaataaatatcaatttctagtaatggacttgcccatggtgagtggagatcgcctccac
tgcatggatattcttttcgccttcaccgctagggtacttggtgggtctgatggcctggat
agcatgaaagcaatgatggaagagaagttcatggaaaccaatcctctcaagaagttgtat
gaacccatagtcaccaccaccaagagaaaggaagaggaaagatgtgctgcagttattcaa
aaggcctttcgaaagtacatgatgaaggtgaccaagggtgaccaaggtgaccaaagtgac
ttggaaaacaggtctcattcaccactccagactctttgcaatggagacttacctagcttt
ggggtggtcaagggcaaggtccactatgactga
DBGET
integrated database retrieval system
