Theropithecus gelada (gelada): 112622109
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Entry
112622109 CDS
T08041
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03320
PPAR signaling pathway
tge04659
Th17 cell differentiation
tge04919
Thyroid hormone signaling pathway
tge04920
Adipocytokine signaling pathway
tge04928
Parathyroid hormone synthesis, secretion and action
tge05200
Pathways in cancer
tge05202
Transcriptional misregulation in cancer
tge05207
Chemical carcinogenesis - receptor activation
tge05216
Thyroid cancer
tge05222
Small cell lung cancer
tge05223
Non-small cell lung cancer
tge05226
Gastric cancer
tge05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
112622109 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
112622109 (RXRB)
03320 PPAR signaling pathway
112622109 (RXRB)
04919 Thyroid hormone signaling pathway
112622109 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
112622109 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112622109 (RXRB)
05202 Transcriptional misregulation in cancer
112622109 (RXRB)
05207 Chemical carcinogenesis - receptor activation
112622109 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
112622109 (RXRB)
05216 Thyroid cancer
112622109 (RXRB)
05222 Small cell lung cancer
112622109 (RXRB)
05223 Non-small cell lung cancer
112622109 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112622109 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tge03000
]
112622109 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tge03310
]
112622109 (RXRB)
Transcription factors [BR:
tge03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
112622109 (RXRB)
Nuclear receptors [BR:
tge03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
112622109 (RXRB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
112622109
NCBI-ProteinID:
XP_025237154
Ensembl:
ENSTGEG00000029459
LinkDB
All DBs
Position
4:complement(35494603..35501829)
Genome browser
AA seq
537 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQQT
PEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPP
PPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVK
PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYS
CRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMP
VDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHF
SSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRS
LSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCK
QKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgctcgcccgcccttcctccctcagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggtggcaggcggagaacaacaaacc
ccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcc
cgaagcccagacagctcctccccaaatccccttccccagggagtccctcccccttctcct
cctggaccacccctgcccccttcaacagctccatcccttggaggctctggggccccaccc
ccacctccgatgccaccccccccactgggctctccctttccagtcatcagttcttccatg
gggtcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagcccc
cagattaactcaacagtgtcactccctgggggtgggtctggcccccctgaagatgtgaag
ccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggct
ggcaaacggctatgtgcaatctgcggggacagaagctcaggcaaacactatggggtttac
agctgtgagggttgcaagggcttcttcaaacgcaccatccgcaaggaccttacatactct
tgccgggacaacaaagactgcacagtggacaagcgccagcggaaccgctgtcagtactgc
cgctatcagaagtgcctggccactggcatgaagagggaggcggtacaggaggagcgtcag
cggggaaaggacaaggatggggatggggagggggctgggggagcccccgaggagatgcct
gtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgag
ggtcctgggggaaccgggggtagcggcagcagcccaaatgaccccgtgactaacatctgt
caggcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttt
tcctccttgcctctggatgatcaggtcatattgctgcgggcaggctggaatgagctcctc
attgcctccttctcccaccgatccattgatgttcgagatggcatcctccttgccacaggt
cttcatgtgcaccgcaactcagcccattcggcaggagtaggagccatctttgatcggtcc
ctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagaca
gagcttggctgcctgagggcaatcattctgtttaatccagatgccaagggcctctccaac
cctagtgaggtggaggtcctgcgggagaaagtgtatgcatcactggagacctactgcaaa
cagaagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctc
cggtccattggccttaagtgtctagagcatctgtttttcttcaagctcattggtgacacc
cccatcgacaccttcctcatggagatgcttgaggctccccatcaactggcctga
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