Theropithecus gelada (gelada): 112622248
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Entry
112622248 CDS
T08041
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112622248 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112622248 (SKIV2L)
Enzymes [BR:
tge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112622248 (SKIV2L)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112622248 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
112622248 (SKIV2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
112622248
NCBI-ProteinID:
XP_025237364
Ensembl:
ENSTGEG00000029417
UniProt:
A0A8D2GLQ1
LinkDB
All DBs
Position
4:34439476..34450351
Genome browser
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGRWELLNLPGTPESSLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLAVLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPTITDLNTWEEAEEEIDFE
KDLLTIPPGFKKGMDFAPKDRPTPAPGLLSLSYLLEPLDLGGGDEDENEAVGQPGGSRRD
AVSASPCSTPLARASSLEDLVLKEASTAVSAPEAPEPPPQEQWAIPVDATSPVGDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGALEEPDMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKSLS
AGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATPEVPYPDD
LVGFKLFLPEGPCEHTVVKLQQGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRF
PAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagagcgactcgtgctacctcctccagatcccctggacctaccccttcgg
gccgtggagctcggatgcacgggtcgctgggagctgctgaacttgcctggaactccggag
agcagccttccccatggcctccctccctgtgccccagatctgcagcaagaagcagaacag
ttgtttctgtcatccccagcctggctgcctctgcatggtgtggagcactcagcccgaaaa
tggcaaaggaagatggatccctggtctcttttggctgtcctgggagccccagtcccatct
gacctacaggcccaaagacacccaaccacaggccagatactaggttacaaagaggtcttg
ctggagaacacaaatctctcggccacaacctccttgtctcttcgccggcctccagggcca
gcctcccagtccttatggggaaatccaactcagtatcccttctggccaggggggatggat
gaacccaccataacagatctgaacacatgggaggaggctgaggaggagatagactttgag
aaagatcttcttactattccacctggtttcaagaaaggcatggactttgcaccaaaagat
cgtccaactccagctcctggactgctaagccttagctatctgttggagcctctggatttg
ggtgggggtgacgaggatgagaatgaggcagtgggacagccaggaggttccagaagggac
gctgtttcagcctctccctgcagtactcccctggcccgagcaagcagtttggaggaccta
gtgttgaaggaagcatccacagctgtatccgccccagaagccccagagcctccacctcag
gagcagtgggccatacctgtggatgccacctcccccgttggtgatttctatcgcctcatt
ccccagccagccttccagtgggcatttgagccagatgtgtttcagaaacaggccatcctg
cacttggagcggcatgactctgtctttgttgcagctcacacatctgcaggaaaaacagtt
gtggctgaatatgccattgccctggcccagaaacacatgacacgcaccatctacacttcg
cccatcaaggccctgagcaaccagaagttccgggacttccgaaacacgtttggggatgtg
gggttgctcactggggatgtgcagctgcacccggaggcctcctgcctcatcatgaccaca
gagatccttcgctccatgctgtacagtggctcagatgttattcgggacctggagtgggtc
atctttgatgaggttcactatatcaatgatgccgagcgtggggtcgtgtgggaggaggtg
ctcatcatgctccctgaccacgtttctatcatccttctgagtgccaccgtccccaacgcc
cttgagtttgctgactggattgggcgactgaagcgtcgtcagatctatgtgattagcact
gtaacccgccccgtgcccctggagcactatcttttcacagggaacagctccaagacccag
ggggagctctttttgttgctggactctcgaggagccttccatacaaaagggtactatgca
gctgtggaggccaagaaggagagaatgagcaaacatgcccagacctttggggccaagcag
cccacacatcaggggggccctgcacaggaccgcggagtttacctgtccctcctggcctcc
ctccgcacacgggcccagttgcctgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcctcaggcctcacctcccttgacctcaccaccagttcagagaagagtgagatc
cacctcttcctgcagcgctgccttgctcgcctccgtggctctgaccgccagctgccccag
gtcctgcacatgtcagagctcctgaatcgtggcctgggtgtgcaccatagcggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgtggcctggtcaaggtcttgttt
gccacagagacctttgccatgggagtaaacatgccggctcgtacagtagtgtttgactcc
atgcgcaagcacgatggctccaccttccgggacctgctccctggggagtatgtgcagatg
gcaggtcgggcagggcggaggggcctggaccccacaggcaccgttatcctgctctgcaag
ggccgagtgcccgagatggcagacctgcaccgcatgatgatggggaagccatcccagctg
cagtcccagttccgcctcacgtacactatgatcctcaacttgctgcgggtagatgccctc
agggtggaggacatgatgaagaggagcttctctgagtttccctcccgcaaggacagcaag
gcccatgaacaagccctggccgaactgaccaagaggctgggggctttggaggagcctgac
atgactggccaactggtcgacctgcctgaatattacggctggggggaggaactgacagag
acccagcacatgattcagcgacgcatcatggagtctgtgaacgggttgaagtctctctca
gcaggaagggtggtggttgtgaagaatcaggagcatcacaacgcactgggagtgatccta
caggtctcctcgaactccaccagcagagtattcacaaccctggtcttgtgtgataagccc
ttgtcccaggacccacaggacagggggccggccactccagaggtgccctatccagatgac
ctcgtgggattcaagctgttcctgcctgaagggccttgtgagcacaccgtagtcaagctc
cagcaaggagatatggctgccatcaccaccaaagtgctccgggtgaatggggagaagatc
ttggaggacttcagcaagaggcagcagccaaaattcaagaaggatcctccccttgcagct
gtgaccactgctgtccaggaactactgcgtctggctcaggctcacccagccggaccccca
acccttgaccctgtcaatgacctgcagctcaaagacgtgtcagttgtagagggtgggctc
cgggcccggaagctggaggagctgatccggggggctcagtgtgtacacagcccccgtttt
ccagcccagtacctgaagctgcgggagcgaatgcagatacagaaggagatggagcggctg
cgcttcctactgtcagatcagtcactgctgctgcttcctgagtaccaccagcgagtagag
gtgctccgaaccctgggttatgtggacgaggcaggcactgtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagttgctcctcactgagctcatgtttgacaatgcacta
agcaccctgcggcctgaggagattgctgccttgctctctggcctggtctgccagagccct
ggggacgctggagatcaactcccaaacactctcaagcagggaatagaacgtgttcgggct
gtggccaagcggattggtgaggtccaggtggcttgtggcctgaaccagacggtggaggaa
tttgtgggcgagctgaattttgggctggttgaggttgtgtatgagtgggcccggggcatg
cccttctccgagttggcagggctctcaggaacccctgagggcctggtggtccgctgcatt
cagcgcctggctgagatgtgtcgctcactgcggggggcagcccgcctagtaggagagcct
gtgctgggcgccaagatggagacagcggctaccttgctacggcgggacatcgtatttgcg
gccagcctctacacccagtga
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integrated database retrieval system
