Theropithecus gelada (gelada): 112622389
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Entry
112622389 CDS
T08041
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03082
ATP-dependent chromatin remodeling
tge04714
Thermogenesis
tge05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112622389 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112622389 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112622389 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tge03000
]
112622389 (ARID1B)
03021 Transcription machinery [BR:
tge03021
]
112622389 (ARID1B)
03036 Chromosome and associated proteins [BR:
tge03036
]
112622389 (ARID1B)
Transcription factors [BR:
tge03000
]
Eukaryotic type
Helix-turn-helix
ARID
112622389 (ARID1B)
Transcription machinery [BR:
tge03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112622389 (ARID1B)
Chromosome and associated proteins [BR:
tge03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112622389 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
112622389
NCBI-ProteinID:
XP_025237776
Ensembl:
ENSTGEG00000025247
LinkDB
All DBs
Position
4:complement(108870724..109315219)
Genome browser
AA seq
2296 aa
AA seq
DB search
MAHNAGAAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSAAAAAASSSSSSGPGSAME
TGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQ
QQQQQQQQQQQQQQQHPISNNNSLGGAGGSAPQPGPDMEQPQHGGAKDSAAGGQADPPGP
PLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGAQQPPVAVPGGGGGPAAVPEFNNYYGS
AAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN
HYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGAGGAGAGAVAAAAAAAAAAAGGGG
GGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGA
TPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAAAGAAAGGQQAAAGM
GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGS
NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGYC
QQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED
LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASP
HLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPM
PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ
YGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQN
RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG
MNQSGLMASSSPYSQPMNNSSGLMNTQAPPYSMAPAMVNSSTASMGLADMMSPGESKLPL
PLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSI
SSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAV
GKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFE
CKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPP
TPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRM
PYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGA
SYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYN
MQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQ
SSSSEGPQQNMWAARNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWP
SHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP
FLPSMKMQKVMPTVPASQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVT
PEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLID
IFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSE
KTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFN
SGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEKSI
IATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCT
IAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQ
TYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLL
HWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYA
TLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQ
QSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNS
LVASVICDVLFQIGQL
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggcccataacgcgggcgccgcggccgccgccgccggcacccacagcgccaagagcggc
ggctccgaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctcc
tccgcggcggcagcggcggcgtcctcttcctcctcgtcgggcccgggctcggccatggag
acggggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcgccgccc
caccagcagcaccaccaccaccaccatgcccaccaccaccaccaccatgcccaccacctc
caccaccaccacgcactacagcagcagctaaaccagttccagcagcagcagcagcagcag
cagcagcagcagcagcaacaacagcagcagcagcagcagcagcaacatcccatttccaac
aacaacagcctgggcggcgcaggcggcagcgcgcctcagcccggccccgacatggagcag
ccgcaacatggaggcgccaaggacagtgccgcgggcggccaggccgaccccccgggcccg
ccgctgctgagcaagccgggcgacgaggacgacgcgccgcccaagatgggggagccggcg
ggcggccgctacgagcacccgggcctgggcgccctgggcgcgcagcagccgccggtcgcc
gtgcccgggggcggcggcggcccggcggccgtcccggagtttaataattactatggcagc
gctgctcctgcgagcggcggccccggcggccgcgctgggccttgctttgatcaacatggc
ggacaacaaagccccgggatggggatgatgcactccgcctccgccgccgccgccggggcc
cccggcagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtgcaac
cattatccgggctacagccggcccggcgcgggcggcggcggcggtggaggaggaggagga
ggaggaggcagcggaggaggaggaggaggaggaggagcaggagcaggagcaggaggagca
ggagcgggagctgtggcggcggcggccgcggcggcggcagcagcagcaggaggcggcggc
ggcggctatgggggctcgtccgcggggtacggggtgctgagctccccccggcagcagggc
ggcggcatgatgatgggccccgggggcggcggggccgcgagcctcagcaaggcggccgcc
ggctcggcggcggggggcttccagcgcttcgccggtcagaaccagcacccgtcgggggcc
accccgaccctcaatcagctgctcacctcgcccagccccatgatgcggagctacggcggc
agctaccccgagtacagcagccccagcgcgccgccgccgccgccgtcgcagccccagtcc
caggcggcggcggcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatg
ggcttgggcaaggacatgggcgcccagtacgccgctgctagcccggcctgggcggccgcg
caacaaaggagtcacccggcgatgagccccggcacccccggaccgaccatgggcagatcc
cagggcagcccaatggatccaatggtgatgaagagacctcagttgtatggcatgggcagt
aaccctcattctcagcctcagcagagcagtccatacccaggaggttcctatggcccccca
ggcccacagcggtatccaattggcatccagggtcggactcccggggccatgggcggaatg
cagtaccctcagcagcagatgcctcctcagtatggacagcaaggtgtgagtggttactgc
caacagggccaacagccatattacagccagcagccgcagcccccacacctcccgccccag
gcgcagtatctgccgtcccagtcccagcagaggtaccagccgcagcaggacatgtctcag
gaaggctatggaactagatctcaacctcctctggcccccggaaaacctaaccatgaagac
ttgaacttaatacaacaagaaagaccatcaagtttaccagatctgtctggctccattgat
gacctccccacgggaacggaagcaactctgagctcagcagtcagtgcatccgggtccaca
agcagccaaggggatcagagcaaccccgcgcagtcgcctttctccccacatgcgtcgcct
catctctccagcatcccggggggcccatctccctctcctgttggctctcctgtaggaagc
aaccagtctcgatctggcccaatctctcctgcaagtatcccaggtagtcagatgcctccg
cagccacctgggagccagtcagaatccagttcccatcccgccttgagccagtcaccaatg
ccacaggaaagaggtttcatggcaggcacacaaagaaaccctcagatggctcagtatgga
cctcaacagacaggaccatccatgtcgcctcatccttctcctgggggccagatgcatgct
ggaatcagtagctttcagcagagtaactcaagtgggacttacggtccacagatgagccag
tatggaccacaaggtaactactccagacccccagcgtatagtggggtgcccagtgcaagc
tacagcggcccagggcccggtatgggtatcagtgccaacaaccagatgcatggacaaggg
ccaagccagccatgtggtgctgtgcccctgggacgaatgccatcagctgggatgcagaac
agaccatttcctggaaatatgagcagcatgacccccagttctcctggcatgtctcagcag
ggagggccaggaatggggccgccaatgccaactgtgaaccgtaaggcacaggaggcagcc
gcagcagtgatgcaggctgctgcgaactcagcacaaagcaggcaaggcagtttccccggc
atgaaccagagtggacttatggcttccagctctccctacagccagcccatgaacaacagc
tctggcctgatgaacacgcaggcgccgccctacagcatggcgcccgccatggtgaacagc
tcgacagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaactgcccctg
cctctcaaagcagacggcaaagaagaaggcactccacagcccgagagcaagtcaaaggat
agctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttcc
ccaatgtcccccagctctgctagcatctcctcatttcatggagatgaaagtgatagcatt
agcagcccaggctggccaaagactccatcaagccctaagtccagctcctccaccaccact
ggggagaagatcacgaaggtgtacgaactggggaatgagccagagagaaagctctgggtc
gaccgatacctcaccttcatggaagagagaggctctcctgtctcgagtctgcctgccgtg
ggcaagaagcctctggacctgttccggctctatgtctgcgtcaaagagattgggggtttg
gcccaggtgaataaaaacaagaagtggcgtgagctggccaccaacctaaacgttggcacc
tcaagcagtgcagcgagctccctgaaaaagcagtatattcagtacctgtttgccttcgag
tgcaagatcgaacgcggggaggagcccccgccggaagtcttcagcaccggggacaccaaa
aagcagcccaagctccagccgccatctcctgctaactcgggatccttgcaaggcccacag
acccctcagtcaactggcagcaattccatggcagaggttccaggtgatctgaagccacct
accccagcctccacccctcacggacagatgaccccaatgcaaggtggaagaagcagcaca
atcagtgtgcacgacccgttctcagacgtgagtgattcatccttcccgaaacggaactcc
atgactccaaacgccccctaccagcagggcatgagcatgcccgatgtgatgggcaggatg
ccctatgagcccaacaaggacccctttgggggaatgagaaaagtgcctggaagcagcgag
ccctttatgacgcaaggacagatgcccaacagcagtatgcaggacatgtacaaccaaagt
ccctccggagcaatgtccaacctgggcatggggcagcgccagcagtttccctatggagcc
agttacgaccgaaggcatgaaccttatgggcagcagtatccaggccaaggccctccctcg
ggacagccgccgtatggagggcaccagcccggcctgtacccacagcagccgaattacaaa
cgccatatggacggcatgtacgggcccccagccaagcgccacgagggcgacatgtacaac
atgcagtacagcagccagcagcaggagatgtacaatcagtacggaggctcctactcgggc
ccggaccgcaggcccatccagggccagtacccatatccctacagcagggagaggatgcag
ggcccggggcagatccagacgcacggaatcccgcctcagatgatgggcggcccgctgcag
tcatcctccagcgaggggcctcagcagaatatgtgggcagcacgcaatgatatgccttat
ccctaccagaacaggcagggccctggcggccctgcacaggcgcccccttacccaggcatg
aaccgcacggacgatatgatggtacccgatcagaggataaatcatgagagccagtggcct
tctcacgtcagccagcgtcagccttatatgtcgtcctcagcctccatgcagcccatcacg
cgcccgccacagccgtcctaccagacgccaccgtcactgccaaatcacatctccagggcg
cccagcccagcatccttccagcgctccctggagaaccgcatgtctccaagcaagtctccc
tttctgccctccatgaagatgcagaaggtcatgcccacggtccccgcatcccaggtcacc
gggccaccaccccaaccacccccaatcaggagggagatcacctttcctcctggctcagtg
gaagcatcacaaccagtcttgaaacaaaggcgaaagattacctccaaagatatcgttact
ccagaggcgtggcgtgtgatgatgtcccttaaatcaggtcttttggctgaaagtacgtgg
gctctggacactattaatattcttctgtatgatgacagcactgttgctactttcaatctc
tcccagttgtctggatttctggaacttttagtcgagtactttagaaaatgcctgattgac
atttttggaattcttatggaatatgaagtgggagaccccagccaaaaagcacttgatcac
aacgcagcaaggaaggacgacagccagtccttggcggacgattctgggaaagaggaggaa
gatgctgaatgtatcgatgatgacgaggaagacgaggaggacgaggaggaagacagcgag
aagacagaaagcgatgaaaagagcagcatcgctctgactgccccggatgccgctgcagac
ccaaaggagaagcccaagcaagccagtaagttcgacaagctgccaataaagatagtcaaa
aagaacaacctgtttgttgttgaccgatctgacaagttggggcgtgtgcaggagttcaat
agtggccttctgcactggcagctcggcgggggcgacaccaccgagcacattcagactcac
tttgagagcaagatggaaattcctcctcgcaggcgcccacctccccccttaagctccgca
ggtagaaagaaagagcaagaaggcaaaggagactctgaagagcagcaagagaaaagcatc
atagcaaccatcgatgacgtcctctctgctcggccaggggcactgcccgaagacgcaaac
cctgggccccagacggaaagcagtaagtttccctttggtatccagcaagccaaaagtcac
cggaacatcaagctgctggaggacgagcccaggagccgagacgagactcctctgtgcacc
attgcacactggcaggactcgctggctaagcgatgcatctgtgtgtccaatattgtccgt
agcttgtcgttcgtgcctggcaatgatgccgaaatgtccaaacatccaggcttggtgctg
atcctggggaagctgattcttcttcaccacgagcatccagagagaaagcgagcaccacag
acctacgagaaagaggaggatgaggacaagggggtggcctgcagcaaagatgagtggtgg
tgggactgcctcgaggtcttgagggataacacgttggtcacgttggccaacatttccggg
cagctagacttgtctgcttacacggaaagcatctgcttgccaattttggatggcttgctg
cactggatggtgtgcccgtctgcagaggcacaagatccctttccaactgtgggacccaac
tcggtcctgtcgcctcagagacttgtgctggagaccctctgtaaactcagtatccaggac
aataatgtggacctgatcttggccactcctccatttagtcgtcaggagaaattctatgct
acattagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatgtccatggcg
cttttatcgaaccttgcccaaggggacgcgctagcagcaagggccatagctgtgcagaaa
ggaagcattggaaacttgataagcttcctagaggatggggtcacgatggcccagtaccag
cagagccagcacaacctcatgcacatgcagcccccgcccctggaaccacctagcgtggac
atgatgtgcagggcggccaaggctttgctagccatggccagagtggacgaaaaccgctcg
gaattccttttgcacgagggccggttgctggatatctcgatatcagctgtcctgaactct
ctggttgcatctgtcatctgtgatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
