Theropithecus gelada (gelada): 112622839
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Entry
112622839 CDS
T08041
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04014
Ras signaling pathway
tge04015
Rap1 signaling pathway
tge04024
cAMP signaling pathway
tge04517
IgSF CAM signaling
tge04520
Adherens junction
tge04530
Tight junction
tge04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
112622839 (AFDN)
04015 Rap1 signaling pathway
112622839 (AFDN)
04024 cAMP signaling pathway
112622839 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112622839 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112622839 (AFDN)
04530 Tight junction
112622839 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
112622839 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
112622839
NCBI-ProteinID:
XP_025238588
Ensembl:
ENSTGEG00000028524
LinkDB
All DBs
Position
4:complement(123763221..123905079)
Genome browser
AA seq
1843 aa
AA seq
DB search
MALARNRTPPRKGVPPPPLGLRGGALCGGLCPEGGAGPGLAPREEEEITLSPGLDLEFHG
VMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGE
ERRLDIDEKPLVVQLNWNKDDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRT
LSKKEKKEKKKREKEALRQASDKDDRPFQGEDVENSRLAAEVYKDMPETSFTRTISNPEV
VMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAE
ALEKYGLEKENPKDYCIARVMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGILV
FQLKRRPPDHIPKKTKKHLEGKTPKGKERADGSGYGSALPPEKLPYLVELSPGRRNHFAY
YNYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKLDDSSIQLFGPGIQPHHCDLTNMDGVVT
VTPRSMDAETYVEGQRISETTMLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLMVK
GPRHKPGIVQETTFDLGGDIHSGTALPTSKSTTRLDSDRVSSASSTAERGMVKPMIRVEQ
QPDYRRQESRTQDASGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYM
ACRYVLSNQYRPDISPTERTHKVIAVVNKMVSMMEGVIQKQKNIAGALAFWMANASELLN
FIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKID
DVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIR
QQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQA
LLQNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGY
SCDVVRNIPNGLQEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLLRENTELAQP
LRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLS
VDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSG
KPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLTKNRADHRSSPNVANQP
PSPGGKSAYASGTAAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQD
RMAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRKS
DSDMWINQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAIPATPVAVSQPI
RTDLPPPPPPPPVHYAGDFDGMSMDLPLPPPPSTNQIGLPSAQVAAAERKKREEHQRWYE
KEKARLEEERERKRREQERKLGQMRTQSLNPAPFSPLTTQQMKPEKPSTLQRPQETVIRE
LQPQQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEI
QELQSKPDRSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAE
RRARDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKRDAEEKRRQEEGYYSRLEA
ERRRQHDEAARRLLEPEAPGLCRPPLPRDYEPSSPSPAPGAPPPPPQRNASYLKTQVLSP
DSLFTAKFVAYNEEEEEEEDCSLAGPNSYPGSAGAAVGAHDAYRDAKEKRSKSQDADLPG
SSGAPENLTFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcccggaatcggactcccccgaggaaaggcgtgcctcctccacctctgggg
ctgcgaggaggggccctctgcggtggcctctgcccggagggaggcgccggccccgggctg
gctccccgagaggaggaggaaatcacgctctctcctggcctggatttggagttccatgga
gtgatgagattttattttcaagataaagctgctggaaactttgcaacaaaatgtattcgg
gtctctagtactgccaccactcaagatgtaatcgaaacgctcgcagagaaatttcgacct
gatatgcgaatgctgtcctctcccaagtattcactctatgaagtgcatgtcagcggagaa
gaaagaagattggacatagatgagaaacctctagttgtacaattgaattggaacaaagat
gaccgggaaggcagatttgttcttaagaatgagaatgacgccattcctcctaagaaggct
caaagtaatggacctgaaaagcaggaaaaagaaggggttatccagaacttcaagagaact
ctgtcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcattgcgacaggcg
tctgataaagatgatagacctttccaaggggaggatgttgaaaattctcgactggctgct
gaggtttacaaagacatgcctgaaaccagctttactcgaaccatttctaatcctgaggtg
gttatgaaacgacggaggcaacaaaaattggaaaagagaatgcaggaatttcggagctca
gatgggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaaccaaat
attccctacaagacaatcctgctgtctactacagatcctgcagactttgctgtggctgaa
gctttagagaagtatggtctggaaaaagaaaaccctaaggattactgcattgcccgggtt
atgcttcctcctggagcccagcattctgatgaaaagggtgctaaagaaattattcttgac
gatgatgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggattttagtc
tttcagttgaagaggaggccaccagaccacatcccaaagaaaaccaagaaacacttggaa
ggcaagacacccaagggaaaggagagagctgatgggtctggctatggctccgcccttcct
ccggagaagctgccctatttagtagagttaagcccagggagaaggaatcactttgcctac
tacaactatcacacttatgaagatggttctgactctagagataagccaaagctttaccgc
cttcagttaagtgttactgaagttggtacagaaaaattggatgacagctctatccagttg
tttggcccaggaattcagccccatcactgtgacctcaccaacatggatggagtggtcact
gtgacgcccagaagtatggacgcagaaacctatgtggaaggccagcgcatctcggaaacc
accatgctgcagagtggcatgaaagtgcagtttggggcatcccatgtatttaagtttgtg
gaccccagtcaggatcatgctcttgcaaaaagatctgtggatggaggcctgatggttaag
ggcccgagacataaacctggaattgttcaggagacaacttttgatttgggaggagatatt
catagtgggacagcattaccaacaagcaagagcaccactaggctggacagcgacagagta
tcatctgcctctagcacagccgagcggggaatggtgaagccgatgatcagagtagagcag
cagccagattaccgcaggcaagaaagcagaacacaggatgcttctgggcctgaactgata
ctgcctgcaagcattgaattcagggaaagttctgaagattcatttttatctgccattata
aattatactaatagctctacagtccactttaagttgtcccctacatatgtattatatatg
gcatgccggtatgtattgtccaaccagtacagacctgacatcagccctacagagcgcacg
cataaagtcattgcagtcgtcaacaagatggtgagcatgatggagggcgtcatccagaaa
cagaagaatattgcaggggcacttgccttctggatggcaaatgcatctgaacttctcaac
ttcattaagcaagaccgagaccttagtcggatcacactggatgctcaagatgttttagca
catttggttcaaatggcatttaagtacttggttcactgccttcagtcggaacttaataat
tacatgccagcctttctagatgaccctgaagagaacagtctgcaaagaccaaaaatagat
gatgtgctgcacacgctcacaggagccatgtccttgctacgacgctgcagagtcaatgcc
gccctgaccatccagctcttctcgcagcttttccattttatcaatatgtggctgttcaat
agattagtgactgacccagattcagggctgtgctcccattactggggcgcaattatccgt
cagcagctgggccatattgaagcctgggctgagaagcaggggctggagctggctgcagac
tgtcatctgagcaggatcgtgcaggcaacaactttgcttaccatggataagtatgcacct
gatgacattccaaatataaacagcacctgctttaagttaaattcactacaacttcaagcc
ttattacagaactatcactgtgcacctgatgagccttttatcccaacagatcttatagaa
aatgtagtggctgtggctgaaaacactgctgatgagctcgcccgtagcgatggaagggaa
gtgcagttggaggaggatcctgacctgcagctgccatttcttttgccagaagatggttat
tcttgtgatgttgtcagaaacattccaaatggtttacaagaatttttagaccctctgtgc
cagagaggattttgcaggttaattcctcacacacgttcaccaggtacttggacaatatat
tttgaaggtgcagattatgaaagtcaccttctgcgtgagaacacagagctggctcagcct
ctgaggaaagaacctgaaataatcactgtgaccctaaaaaagcagaatggaatgggcctt
agcattgttgcagcaaagggtgctggtcaagataaactaggaatctatgtgaagtcggtt
gtgaaaggaggtgctgcagatgtggatggacgtctagctgcaggtgatcaactcctcagc
gtggatggacgaagtctggttggactctctcaggaaagggcagcagaactcatgacaaga
acaagctctgtggtgacactggaagtagcaaagcagggtgccatctaccacggtctggcc
acccttctcaatcagccatcccccatgatgcagagaatttcagatcgtcgtggctcaggc
aaaccccgaccaaagagtgaaggctttgaactctataataattccgctcaaaatgggtct
cctgagagtcctcagctgccttgggcagaatatagtgaaccaaagaaattgcccggtgat
gacagactgacgaaaaatagagctgatcaccgttccagccccaacgtagcaaatcagcct
cctagtcctggagggaaaagtgcatatgcctctggaacagcagcgaagataacatctgtc
tctactggaaacctctgcactgaggagcagacgcctccgcctagacctgaagcctacccc
atccccactcagacgtacaccagagagtattttaccttcccagcttccaaatcccaggat
cggatggctcctcctcagaaccagtggccaaattatgaggaaaagccacatatgcacaca
gatagtaatcactccagtattgcaattcagcgtgttacacgttcccaagaagaacttcga
gaagataaagcttaccaacttgagcggcatcgaatagaggcagctatggacagaaagtct
gatagtgatatgtggataaatcagagctcctcattggactccagtacatctagccaagag
cacctgaaccattcctctaagtcggtcacccctgcttccacactgaccaaaagtggccct
ggccgttggaaaacaccagcagcaataccggccacccctgtggccgtctcccagccaatc
cgaacagacctgcctccgccacccccgccacctcccgtccactacgccggtgatttcgat
ggaatgtccatggatttgcctctcccaccacccccttccaccaaccagataggactaccc
tctgcgcaggtggctgctgccgaacggaaaaagagagaggaacatcagcgttggtatgag
aaggagaaggcccgcctggaggaggagcgggagaggaagcggagagagcaggagaggaag
ttgggccagatgcgcactcagtccctaaaccctgctccgttttctcccctgaccacacag
cagatgaagcccgaaaagccttccacactccagcggccccaggaaacagtcattcgggag
ctacagcctcagcagcagccccgcacgatcgagcgcagggacttgcagtatatcacagtc
agcaaagaggagctttcctcgggggacagtctgtctcctgacccgtggaagcgggatgcc
aaggagaagctggagaagcagcagcagatgcacatcgtggacatgctgagcaaggagatc
caggagctccagagcaaaccggaccgcagcgccgaggagagcgaccggctgcgcaagctc
atgctggagtggcagttccagaagcgactacaggagtcgaagcagaaggacgaagatgac
gaggaggaggaggacgacgatgtggacaccatgcttatcatgcagcgcctggaggctgaa
cgaagagcgagggacgaggagcggaggcggcagcagcagttagaagagatgcgcaagcgg
gaagcggaagaccgagcgaggcaagaggaagagcgccggcggcaggaggaggagcgaaca
aaacgagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctggaagct
gagaggcgcagacagcacgacgaggcggcgcgcaggttgctggagcccgaggcacctggt
ctgtgccgccctccgcttccgcgggactacgagccctcgtccccgtcccccgcgcccggc
gcccctcctcccccgcctcagcgaaacgcctcctacctcaaaacccaggtcctctccccc
gactcgctgttcactgccaagtttgttgcatacaatgaggaggaggaggaggaggaggac
tgcagcctagcaggaccaaactcttacccaggatctgccggagcagctgttggagcccat
gacgcttatcgggatgcgaaagagaagcgttctaaaagccaagatgcagatttacctgga
agttctggggcccctgaaaacttgacattcaaggaacgccaacgtcttttttcacaaggt
caagatgtatccaataaagtgaaagcctctcgtaaattaacagaactggagaatgaactg
aacacaaaatga
DBGET
integrated database retrieval system