Theropithecus gelada (gelada): 112623531
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Entry
112623531 CDS
T08041
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04120
Ubiquitin mediated proteolysis
tge04137
Mitophagy - animal
tge04141
Protein processing in endoplasmic reticulum
tge05012
Parkinson disease
tge05014
Amyotrophic lateral sclerosis
tge05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112623531 (PRKN)
04120 Ubiquitin mediated proteolysis
112623531 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112623531 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
112623531 (PRKN)
05014 Amyotrophic lateral sclerosis
112623531 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
112623531 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tge04131
]
112623531 (PRKN)
04121 Ubiquitin system [BR:
tge04121
]
112623531 (PRKN)
03029 Mitochondrial biogenesis [BR:
tge03029
]
112623531 (PRKN)
Enzymes [BR:
tge01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112623531 (PRKN)
Membrane trafficking [BR:
tge04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112623531 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
112623531 (PRKN)
Xenophagy
Other xenophagy associated proteins
112623531 (PRKN)
Ubiquitin system [BR:
tge04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112623531 (PRKN)
Mitochondrial biogenesis [BR:
tge03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112623531 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
IBR
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
112623531
NCBI-ProteinID:
XP_025239851
LinkDB
All DBs
Position
4:129371207..130290999
Genome browser
AA seq
386 aa
AA seq
DB search
MNATGGDNARNMAGGCEREPQSLTRVDLSSSVLPGDSVGLAVILHTDSRNDSLPAGSPAD
RPIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGPSCWDDVLIPNRMSGECQSP
HCPGTTAEFFFKCGAHPTSDKETSVALHLIATNSRNITCITCTDVRSPVLVFQCNFRHVI
CLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKELHHFRILGEEQYNRYQQYG
AEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGECSA
LFEASGTTTQAYRVDERAAEQARWEEASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQP
QCRLEWCWNCGCEWNRVCMGDHWFDV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaactggaggcgacaacgccagaaacatggcgggaggctgtgagcgggagccc
cagagcttgactcgggtggacctcagcagctcagtcctcccaggagactctgtgggactg
gctgtcattctgcacactgacagcaggaatgactcactaccagctggcagtccagcagat
agaccaatctacaacagcttttatgtgtattgcaaaggcccctgtcaaagagtgcagccg
ggaaaactcagggtacagtgcagcacctgcagacaagcaacgctcaccttgacccagggt
ccatcgtgctgggatgatgttttaattccaaaccggatgagcggtgaatgccaatcccca
cactgccctgggactactgcagaatttttctttaaatgtggagcacaccccacctctgac
aaggaaacatcagtagctttgcacctgatcgcaacaaatagtcggaacatcacttgcatt
acatgcaccgacgtcaggagccccgtcctggttttccagtgcaacttccgccacgtgatt
tgcttagactgtttccacttatactgtgtgacaagactcaatgatcggcagtttgttcat
gaccctcaactgggctactccctgccttgtgtggctggctgtcccaactccttgattaaa
gagctccatcacttcaggattctgggagaagagcagtacaaccgataccagcagtatggc
gcagaggagtgtgtcctgcagatggggggcgtgttatgcccccgccctggctgtggagcg
gggctgctgccggagcctgaccagaggaaagtcacctgtgaaggcggcaacggcctgggc
tgtgggtttgccttctgccgggagtgtaaagaagcgtaccatgaaggggagtgcagtgcc
ctatttgaagcctcaggaacaactactcaggcctacagagttgatgaaagagccgcagag
caggctcgttgggaagaagcctccaaagaaaccatcaagaaaaccacgaagccctgtccc
cgctgccatgtaccagtggaaaaaaatggaggctgcatgcacatgaagtgtccgcagccc
cagtgcaggctcgagtggtgctggaactgtggctgcgagtggaaccgcgtctgcatgggg
gaccactggttcgacgtgtag
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