Theropithecus gelada (gelada): 112624623
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Entry
112624623 CDS
T08041
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
tge
Theropithecus gelada (gelada)
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112624623 (DDX60)
Enzymes [BR:
tge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112624623 (DDX60)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
112624623 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
112624623
NCBI-ProteinID:
XP_025241201
Ensembl:
ENSTGEG00000020495
UniProt:
A0A8D2FNF4
LinkDB
All DBs
Position
5:complement(165089822..165193397)
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AA seq
1712 aa
AA seq
DB search
MERNVLTTFSQQMSQLILNEMPKAEYSSLFNDFVESEFFLIDGDSLLITCICEISFKPGQ
NLHFFYLVERYLVDLISKGGQFTIVFFEDAEYAYFNFPELLSLRTALILHLQKNTTIDVR
TTFSRCLSEEWGSFLEESYPYFLIVADEGLNDLQTHLFNFLIIHSWARKVNVVLSSGQES
DVLRLYAYLLPSMYRQQIFFQKNKRNFKDAYVTLLNQLKRFKLSALAPLFGSLKWNNIME
EAHETVSMLTQVWPEGSDIRRVFCVTSCSLSLRMYHRFLGNREPSSGQETEIQQVNSNCL
TLQEMEDLCKLHCLTVVFLLHLPLSQRACARVVTSHWAKDMKPLLQMKKWCEYFILRNIH
TFEFWNLNLIHLSDLSDELLLKNIAFYYENENVKGLHLNLGDTIMKDYEYLWNTVSKLVR
DFEVGQPFPLRTTKFCFLEKKPSPIKDSASEMVPNLGFIPMSSFVVDKFAGDILKDLPFL
KSDDPIVTSLVKQKEFDELVHWHSHKPLSDDYDRSRCQFDEKSRDPRVLRSVQKYHVFQR
FYGNSLETVSSKIIVTQTIKSKKDFSGPKSKKAHETKAEIITRENKKRLFAKEEQKEEQK
WNALSFSIEEQMKENLYSGIKNLEDFLKSCKSSSVKLRVEMVGLTACLKAWKEHCRSEEG
KTTKDLSIAVQMMKRIHSLMEKYSELLQEDDRQLIARCLKYLGFDELANSLHPTQDAEND
VKAKKRNKYSVGIGPARFQLQYMGHYLIRDERKDPDPRVQDFIPDTWQRELLDVVDKNES
AVIVAPTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALVNQVAATVQNRFMKNLPSGE
ALCGVFTREYRHDALNCQVLITVPACFEILLLAPHRQNWVKKIRYVIFDEVHCLGGEIGA
EIWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKWYWKQEDKIIENNTASKRHVGHHAG
FPKDYLQVKQSYKVRLVLYGERYNDLEKHVCSIKHDDIHFDHFHPCAALTTDHIERYGFP
PDLTLSPRESIQLYDAMFQIWKSWPRAQELCPENFIHFNNKLVIKKMDARKYEESLKSEL
TSWIKNGNIEEARMVLQNLSPEADLSPENMITKFPLLVEKLRKMEKLPALFFLFKLGAVE
DAAKNVSTSLKKKQETKRPPKADKEAHVMANKLRKVKKSIEKQKILDEKSQKKNRNVDQS
LIHEAEHDNLLKCLEKNLEIPQDCTYADQKAVDTETLQKVFGRVKFERKGEELKALAERG
IGYHHSAMSFKEKQLVEILFRKGFLRVVTATGTLALGINMPCKSVVFAQNSVYLDALNYR
QMSGRAGRRGQDLMGDVYFFDIPFPKIGKLIKSNVPELRGQFPLSITLVLRLMLLASKGD
DPEDAKAKVLSVLKHSLLSFKQPRVMDMLKLYFLFSLQFLVKEGYLDQEGNPMGFAGLVS
HLHYHEPSNLVFVSFLVNGLFHDLCQPTSKGSKRFSQDVMEKLMLVLAHLFGRRYFPPKF
QDTHFEFYQSKVFLDELPEDFSDALDEYNMKIMEDFTAFLRIVSKLADMNQEYQLPLSKI
KFTGKECEDSQLVSHLMSCKEGRVAISPFVCLSGNFDDDLLRLETPNHVTLGTIGVNRSQ
APVLLSQKFDNRGRKMPLNAYALDFYKHGSLLGLVQDNRMNEGDAYYLLKDFALTIKSIS
VSLRELCENEDDNVVLAFEQLSTTFSEKLNKV
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaatgttcttacaacattttcacagcaaatgtcccagttaattttgaatgaa
atgccaaaagctgaatattccagtttattcaatgattttgttgaatctgaattttttttg
attgatggggattcattacttatcacatgtatctgtgagatatcatttaagcctgggcag
aaccttcatttcttctatctggttgaacgctatcttgtggatcttattagcaaaggagga
caattcaccatagttttcttcgaggatgccgagtatgcctatttcaacttccctgaactt
ctttctttgagaactgctttaattcttcatcttcagaagaataccaccattgatgttcga
acaacattttcgagatgcttatcagaagagtggggaagtttcttggaggagagttaccca
tatttcctgatagttgcagatgaaggcctgaacgatctacaaacacaccttttcaacttt
ttaatcattcattcttgggcaaggaaggtcaatgttgtactttcctcagggcaagaatct
gatgttcttcgcctttatgcgtaccttcttccaagcatgtacagacaacagatttttttc
cagaagaataaacggaactttaaagatgcttacgtaaccctgcttaaccagttgaaaaga
tttaagctttcagcattagcacctctttttggaagtttaaaatggaataatattatggaa
gaggcacacgagactgtctctatgcttacacaagtctggccagaaggatctgacattcgg
cgtgtcttttgtgttacctcatgctcattatccttgagaatgtaccatcgctttttagga
aacagagagccctcctccggtcaggaaactgagatccaacaggtgaacagtaactgctta
accctgcaggagatggaagatttgtgtaaactgcactgtctcactgtggtttttctactc
catctgcctctttctcaaagagcttgtgctagagtcgtcacttcccattgggctaaggac
atgaagcctttattacaaatgaaaaaatggtgtgaatatttcatcttaagaaatatacat
acttttgaattttggaatctgaatttaattcacctttctgacttaagtgatgagcttttg
ttgaagaatattgctttttactatgaaaatgaaaatgtaaaaggcctacatttgaatttg
ggagataccattatgaaagattatgaatatctctggaataccgtatcaaagttggtcaga
gactttgaggttggacagccatttcctctgagaacaacaaaattttgttttcttgaaaag
aaaccatcaccaatcaaagacagcgccagtgaaatggtgcccaatttgggttttattcca
atgtcctcttttgtggttgataaatttgctggagatattttgaaagatttgccttttcta
aagagtgatgatcctattgttacttcactggttaaacaaaaggaatttgatgaacttgtg
cactggcattctcataaacccctgagtgatgattatgacaggtccaggtgtcagtttgat
gaaaaatctagagaccctcgtgttcttagatctgtgcaaaagtatcatgttttccagcgg
ttttatgggaattcattagaaacagtctcttcaaaaatcatcgtgactcaaactattaag
tcaaagaaggattttagtgggcccaagagcaaaaaggcacacgagaccaaggctgaaata
attactagagagaataagaaaaggttatttgccaaggaagaacaaaaggaagagcaaaag
tggaatgctttgtcattttctattgaagagcaaatgaaagagaatttatactctggaata
aagaacctggaagactttttgaaatcctgtaaaagtagctctgtgaaacttcgggttgaa
atggtgggattaactgcttgcttgaaagcctggaaagaacattgccgaagtgaagaaggt
aaaaccacaaaagatttaagtatagctgttcaaatgatgaaaaggatccactccttgatg
gaaaaatactcagaacttctacaagaagatgatcggcaactcatagccagatgccttaag
tatttaggatttgatgagttggcaaattctttacatccaactcaggatgcagaaaatgat
gtaaaagcgaagaaaaggaataaatattcagttggcatcgggccagctcggttccaactg
caatacatgggccattatttgatacgagatgagagaaaagacccagatcccagggtccag
gattttattcccgacacatggcagcgagagctccttgatgttgtggataagaatgagtct
gcagtgattgttgccccaacatcctcaggcaaaacctatgcctcctactactgcatggag
aaagtactgaaggaaagcgatgatggggtggtcgtgtacgttgctcccacaaaggccctt
gttaatcaagtggcagcaactgttcagaatcgttttatgaaaaatctgccaagtggtgag
gctctctgcggtgttttcaccagggagtatcgtcatgacgccttaaactgtcaggtactt
attacagtgcctgcctgctttgaaattctgctgcttgctcctcatcgccaaaactgggtg
aaaaagatcagatatgttatatttgatgaggttcattgtcttggtggagaaattggagca
gaaatctgggaacatctcctcgtcatgatccgatgtccctttttggctctttcggctacc
ataagtaatcctgaacatctcaccgagtggctacaatcggtaaaatggtactggaaacaa
gaagacaaaataattgaaaataatactgcttctaaaagacatgtgggtcatcatgctggc
tttcccaaagactacctgcaagtaaaacagtcatataaagttagacttgtgctctatgga
gagaggtacaatgatctagagaagcatgtatgttcaataaaacatgatgacatccatttt
gatcattttcacccatgtgctgcactaaccacagatcatattgaaaggtatggattccct
cctgatcttaccctttcacctcgagaaagcatccagctatatgatgccatgtttcaaatt
tggaaaagttggccccgggcccaggaactgtgcccagaaaacttcattcattttaacaat
aaattagtcattaaaaagatggatgctagaaaatatgaagagagtctaaagtcagaatta
acaagttggattaaaaatggcaacatagaggaggccagaatggtacttcagaatcttagt
cctgaagcagatttgagtccagaaaacatgatcacgaagtttccgcttctagttgaaaaa
ctaaggaaaatggagaagttacctgcattattttttttgttcaagttaggagctgtagaa
gacgcagccaaaaatgtgagcacttccctaaagaaaaagcaggagacaaaaaggcctccc
aaagctgataaagaagcccatgtcatggctaacaaacttcgaaaagttaaaaaatccata
gagaaacaaaagatcttagatgaaaagagccagaaaaaaaacagaaatgtggatcaaagc
ctaatacatgaggctgaacatgataatctgctgaagtgtctagagaagaacctagaaatc
ccacaggactgcacatatgctgatcaaaaagcagtggacaccgagactttgcagaaggta
tttggtcgagtaaaatttgaaagaaaaggtgaagaattgaaagccttggcagaaaggggt
attggatatcatcacagtgctatgagtttcaaagaaaaacaattagttgaaatcctcttt
aggaaaggatttcttagggtggtgacagctactggaacacttgctttaggtatcaacatg
ccttgtaagtctgtggtttttgctcaaaactcagtctatctggatgccttgaattataga
cagatgtctggccgtgctggaagaagaggtcaagacctgatgggagatgtatatttcttt
gatattccattccccaaaataggaaaactcataaaatccaatgttcctgagctgagagga
cagttccctctcagcataaccctggtcctgcgactcatgctgctggcttccaagggagat
gatccagaggatgccaaggcaaaggtgctatcagtgctaaagcattcattgctgtccttc
aagcaacccagagtcatggacatgttaaaactttacttcttgttttctttgcagttcttg
gtgaaagagggctatttagatcaagaaggtaatcctatggggtttgctggacttgtatca
catttgcattaccatgaaccttctaatcttgtttttgtcagttttcttgtaaatggcctt
ttccatgatctctgtcagccaaccagtaaaggctcaaaacgtttttctcaagacgttatg
gaaaagctaatgttagtattggcacatctcttcggaagaagatattttccaccaaagttc
caagatacacacttcgagttttatcaatcaaaggtgttccttgatgagctccctgaggat
ttcagtgatgctttagatgagtataacatgaaaattatggaggactttaccgctttccta
cgaattgtttccaaactggctgatatgaatcaggaatatcaactcccattgtcaaaaatc
aaattcacaggtaaagaatgtgaagactctcaactcgtatctcatttgatgagctgcaag
gaaggaagagtagcaatttcaccatttgtttgtctgtctgggaactttgatgatgatttg
cttcgactagaaactccaaaccatgttactctaggcacaatcggtgtaaatcgctctcag
gctccagtgctgttgtcacagaaatttgataaccgaggaaggaaaatgccgcttaatgcc
tatgcactggatttctacaaacatggttccttgctaggattagtccaggataataggatg
aatgaaggagatgcttattatttgttgaaggattttgcactcaccattaaatctatcagt
gtttccctgcgtgagctatgtgaaaatgaagacgacaacgttgtcttagcctttgaacaa
ctgagtacaactttttcggaaaagctaaacaaagtctaa
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integrated database retrieval system
