Theropithecus gelada (gelada): 112627439
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Entry
112627439 CDS
T08041
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04140
Autophagy - animal
tge04148
Efferocytosis
tge05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112627439 (VPS39)
04148 Efferocytosis
112627439 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112627439 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tge04131
]
112627439 (VPS39)
Membrane trafficking [BR:
tge04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
112627439 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
KCTD11_21_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
112627439
NCBI-ProteinID:
XP_025245474
Ensembl:
ENSTGEG00000003453
UniProt:
A0A8D2ECP9
LinkDB
All DBs
Position
7a:complement(17548778..17596445)
Genome browser
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPAAVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQRLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLA
VPYLEHIIHVWEETGTRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEY
RQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAE
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHS
KLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcaaatcgactgt
ctcgctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttgtgccagcagctgtagcatcacctgaaagtggcagttgcaac
agatttgaagtgacactagagaaatccaataagaacttctccaaaaaaattcagcagatc
catgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtccat
gacctattgacatttcaacaaatcactacggtttcaaaggcaaagggagcatcactgttt
acgtgtgacctccagcacacagagaccggtgaggaggtgttacggatgtgtgtggcagta
aaaaagaagctgcagctctatttctggaaggacagggaatttcatgaattgcagggggac
tttagtgtaccagatgtgcccaagtccatggcgtggtgtgaaaattctatctgtgtgggt
ttcaagagagactactacctaatacgggtggatggaaaggggtccatcaaagagctcttt
ccaacaggaaaacagctggagcccttagttgcacctctggcagatggaaaagtggctgtg
ggccaggatgatctcaccgtggtactcaatgaggaagggatctgcacacagaagtgtgcc
ctgaactggacggacatacccgtggccatggagcaccagcctccctacatcattgcagtg
ttgcctcgatacgtggagatccgaacatttgaaccgaggcttctggtccagagcattgaa
ttgcaaaggccccgtttcattacctcaggaggatcaaacattatctatgtggccagcaat
cattttgtttggagactcatccctgtcccgatggcaacccaaatccaacaacttctccag
gacaagcagtttgaattggctctgcagctcgcagaaatgaaagatgattccgacagtgaa
aagcaacaacaaattcatcacatcaagaacttgtatgctttcaacctcttctgccagaag
cgttttgatgagtccatgcaggtctttgctaaacttggcacagatcccacccatgtgatg
ggcctgtacccggacctgctgcccacagactacaggaagcagttgcagtatcccaaccca
ctgcctgtgctctccggggctgaactggagaaggctcacttagctctgattgactacctg
acacagaaacgaagtcaattggtaaagaagctgaacgactctgatcaccagtcaagcacc
tccccactcatggaaggcactcccaccatcaaatccaagaagaagctgctacaaatcatc
gacaccaccctgctcaagtgctatctccatacgaatgtggccctggtggcccccttgcta
cgcctggagaacaatcactgccacattgaggagagcgagcacgtgctgaagaaggctcac
aagtacagtgagcttatcatcctgtatgagaagaaggggctccacgagaaagctctgcag
gtgctcgtggaccagtccaagaaagccaactcccctctgaaaggccacgagaggacagtg
cagtatctgcagcgtctgggcacagaaaacctgcatttgattttctcctactccgtgtgg
gtgctgagagacttcccagaagatggcctgaagatatttactgaagatctcccagaagtg
gagtctctgccacgtgatcgagtcctcggcttcttagtagagaattttaagggtctggct
gttccttatctggaacacatcatccacgtttgggaggagacaggcactcggttccacaac
tgcctgatccagctgtactgtgaaaaggtgcaaggtctgatgaaggagtacctcctgtcc
ttccccgcaggcaagaccccagtcccagctggagaggaagagggcgaactgggagaatac
cggcaaaagctcctcatgttcttggagatttccagctactatgatccgggccggctcatc
tgtgattttccctttgatggcctcttagaagaacgagctctcctgttggggcgcatgggg
aaacacgaacaagctcttttcatttatgtccacatcttgaaggatacaaggatggctgag
gagtactgccacaaacactatgaccaaaacaaagatggcaacaaagatgtgtatctgtcc
ctgcttcggatgtacctgtcgccccccagcattcactgcctggggccaatcaaactggaa
ctgctggagccaaaagccaacctccaggctgccctgcaggtcctggagctgcaccacagc
aaactggacaccaccaaggccctcaaccttctgccagcaaacactcagatcaatgacata
cgcatcttcctggaaaaggtcttggaagaaaatgcacaaaagaaacggttcaatcaagtg
ctcaagaaccttctccatgcagagttcctgagggtccaggaagagcggattttacaccag
caggtgaagtgcatcatcacagaggagaaggtgtgcatggtgtgtaagaagaagattggg
aacagtgcatttgcaagataccccaatggagtggtcgtgcactacttctgttccaaagag
gtaaacccagctgacacttga
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