Theropithecus gelada (gelada): 112632734
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Entry
112632734 CDS
T08041
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03015
mRNA surveillance pathway
tge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112632734 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
112632734 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112632734 (PABPC1L)
03041 Spliceosome [BR:
tge03041
]
112632734 (PABPC1L)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112632734 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
112632734 (PABPC1L)
Spliceosome [BR:
tge03041
]
Complex C
Other components
Complex C specific factors
112632734 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_7
RRM_Nup35
RRM_MARF1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112632734
NCBI-ProteinID:
XP_025254468
Ensembl:
ENSTGEG00000021215
UniProt:
A0A8D2FWF1
LinkDB
All DBs
Position
10:complement(57710817..57741187)
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AA seq
614 aa
AA seq
DB search
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERE
AELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEK
HEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKN
LDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRFSTMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAY
YGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHISSVRQASTQVPHMVPHTQR
VANIGTQTTGPGAVGCCTPGRPLLPYKCSSAAHSTYRIQEPAVHVPGQEPLTASMLAAAP
LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL
QAHQAMEQPKAYMH
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggctcgggctacccgcttgcctcgctctacgtgggcgatctgcacccc
gacgtgaccgaggccatgctctatgagaagttctctcccgccggccccatcctgtctatc
cgcgtgtgccgcgatgtggccacccggcgctcgctgggctacgcctacatcaacttccag
cagcccgcggacgcggagcgggcactggacacaatgaactttgaaatgctcaaaggccag
cctattcgcatcatgtggtcccagcgagacccaggacttcgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggctttatatgataccttctcc
acctttgggaacatcctctcctgcaaggtggtgtgtgacgagcatggctcccggggtttc
ggctttgtccattttgagacgcatgaggccgcacagcaggccatcaacaccatgaacggg
atgctactgaatgaccgcaaagtctttgtgggccacttcaagtctcgacgggagcgggag
gcggagctgggggcgcgggccctggagttcaccaacatctacgtgaagaacctcccggtg
gatgtggacgagcaaggcctgcaggacctcttctcccagtttgggaagatgttgagtgtg
aaggtgatgagggacaacagcggtcactcgcggtgctttggctttgtcaactttgagaag
catgaggaagcccagaaggctgtggtgcatatgaatgggaaggaggtgagtgggcggctg
ctgtacgcgggccgggcccaaaagcgcgtggagcggcagaatgaactgaagcgcaggttt
gagcagatgaagcaggaccggctgaggcgttaccagggtgtgaacttgtacgtgaagaac
ctggacgactccattgatgatgacaaactgaggaaagagttctctccctatggagtaatt
accagtgcgaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctccccagaagaggcgacaaaggctgtgacagagatgaacgggcgcatcgtgggcacc
aagccactctacgtggcactggcccagcgcaaagaggagcggaaggccatcttgaccaac
cagtacatgcaacgcttctccaccatgcggaccctgagcaaccccctcctgggctccttt
cagcagccctccagctacttcctgcctgccgtgccccagcctccagcccaggctgcatac
tatggctgtggcccggtgacacccacccagcctgctcccaggtggacgtcccagccacct
agaccttcctgtgcctcaatggtccggccacccgtcatgcctcgtcgccccccagcccac
atcagcagtgtcaggcaggcctccacccaggtgccacacatggtgcctcatacccagaga
gtagccaacattggtactcagaccacaggacccggtgcggtaggatgctgtacaccaggc
cggcctctcctgccatacaaatgttcctcagcagcacatagcacctatcggatccaggag
ccggctgtgcacgtcccgggacaggagcccctgaccgcatccatgctggctgcggcaccc
ctgcatgagcaaaaacagatgattggggagcgtctctacccccttatccatgatgtccac
acccagctggccggcaagatcacgggcatgctgctggagattgacaactcggagctgttg
ctcatgctggagtctccagagtccctccatgccaagatagacgaggcagtggccgtgctg
caggcacaccaggctatggagcagccgaaggcgtacatgcactga
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integrated database retrieval system
