Thermococcus gorgonarius: A3K92_00335
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Entry
A3K92_00335 CDS
T05047
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tgg
Thermococcus gorgonarius
Brite
KEGG Orthology (KO) [BR:
tgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgg03016
]
A3K92_00335
Enzymes [BR:
tgg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
A3K92_00335
Transfer RNA biogenesis [BR:
tgg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
A3K92_00335
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
ASJ00039
UniProt:
A0A2Z2M4U2
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All DBs
Position
complement(65747..66253)
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AA seq
168 aa
AA seq
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MIVFYLSGNRVFSTDKNAIDGLHNNRHYGKLVNGKVFLSLLEAAYLVERGKIEVRDGKRR
LTLEEVMKLGREEDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMDEHSQWLVW
VVPENKTIAPNDITARVRVAHGVRKEMIMAVVDDDGDIVYYKIEWTKF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcttttacctcagcgggaacagggttttctcgaccgataagaacgcaatagac
ggcctccacaacaaccgccactacggtaagctcgtcaacgggaaggtctttctctcactc
ctcgaggcggcctatctggtggagaggggcaagatagaggtaagggacgggaaaaggagg
ctaaccttagaggaagtcatgaagctcgggagggaagaagacgagctgttcgatgccaag
tacctcgtctacaaggatttgagggacaggggctacacggttaaatccggcctaaagttc
ggctcccatttcagggtttacaggcgcggaatggacgagcattcacagtggctcgtctgg
gtcgttccagagaacaagacaatagcccccaacgacataacggccagagttagggtggct
cacggcgtcaggaaggagatgataatggccgtcgttgacgacgacggggacattgtatac
tacaaaatagaatggacaaagttctaa
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