KEGG   Thermococcus gorgonarius: A3K92_06165
Entry
A3K92_06165       CDS       T05047                                 
Name
(GenBank) RNA helicase
  KO
K03725  putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
tgg  Thermococcus gorgonarius
Brite
KEGG Orthology (KO) [BR:tgg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgg03019]
    A3K92_06165
Messenger RNA biogenesis [BR:tgg03019]
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Others
     A3K92_06165
SSDB
Motif
Pfam: DEAD DUF5814 Helicase_C ResIII DPM3
Other DBs
NCBI-ProteinID: ASJ01093
UniProt: A0A2Z2M740
LinkDB
Position
complement(1099779..1102355)
AA seq 858 aa
MLFVVRPGRKKNELEAFFIEKESEKLSQMQGLKADRVYRFIMREGRLFKVLEGSQYRNPK
EIEKLLRQARIVLVNADEWEDYFKRRLQNKNVEKAELCRLCLLEDKITVLTEGNRIKYRN
EYICERCAEDELKRELRFRFNSIAMFDQAKKLLERFRDLDKVLYAFDPRFDPTKHPEITK
WDELKAKHVKVERLKVDELPLPERFKEVLKGEGVNELLPVQSLAVKNGLLDGENLLVVSA
TASGKTLIGELAGIPKAMEGKKMLFLVPLVALANQKYEDFKRRYSKLGLRVAIRVGMSRI
KTKDELVVVDTDIDADIIVGTYEGIDYLLRAGRKIGNVGTVIIDEIHTLDDEERGPRLDG
LIARLRKLYPHAQFIGLSATVGNPEELAKELGLKLVLYDERPVDLERHVIIARNESEKWR
HVANLCKAEAMRKSKQGYKGQTIVFTFSRKRTHELSAYLTSKGLKAKPYHSGLPYKQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGKVYLIVEPGRKYSAQMEGAEDEVAFKLLTAPIEPVTVEWSDELEQDNVLAHSCVFNR
LEVIEEVQARCLGANQSAEKVLEKLEEFGLVRLKRPFVEVTPYGRAVSMSFLLPKEAEFI
RISLGKKPARWIAVKLLPFENLYLSGTLQRELEGAVRGRISANVFSSSFASILEELDRVI
PELSPNAAERLFTIYQDFFMCGEDDCTEYAMEKVSNLIIELRRSGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFRFRNVEEEAKVLKREIEEARTIRNGGERKGR
KGFTSSAGRGRELRRGQR
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgctcttcgttgtgagaccagggagaaagaagaacgagcttgaggccttcttcattgag
aaagagtccgaaaagctttcccagatgcaggggcttaaggctgacagagtttaccgcttc
ataatgcgcgagggaagactcttcaaggttcttgaggggagccaataccggaacccaaag
gagatagagaaactcctccgccaggccaggatagtgcttgtaaacgccgacgagtgggag
gactacttcaaaaggaggctccagaacaagaacgtcgagaaggccgagctgtgtcgcctc
tgcctacttgaggacaagattacggttttgacagagggcaacaggattaagtaccgcaac
gagtacatctgcgagcgctgtgccgaggacgagctcaagagagaactccgcttccgcttc
aacagcatagctatgttcgaccaggctaaaaagcttttggagaggtttagagacctcgac
aaagtcctatacgctttcgacccgcgctttgacccgacgaagcatccagagattaccaag
tgggacgagctcaaggcaaagcacgttaaggttgagaggcttaaggtcgatgagctaccc
ctccctgagaggtttaaggaagtcctgaagggggagggcgtaaacgaactccttccggtt
cagagcttggccgtgaagaacggcctccttgacggcgaaaacctgttggtggtttccgcc
actgccagcggtaagacgctcatcggcgagctcgcgggaatcccgaaggcgatggaagga
aaaaagatgctcttcctggtgccgctggtggccctcgcaaaccagaagtacgaggacttc
aagagaaggtattccaaactcggcctcagggtggccatacgcgttggcatgagcaggata
aagacgaaggatgagcttgtggttgttgataccgacattgatgcagacataatcgtcgga
acctatgagggaatagactacctgctcagagctgggagaaagataggaaacgtcggaacg
gttatcatagatgagatccacacgctggacgacgaggagcgcgggccccgtctagatggc
ctcatcgcgaggctgagaaaactctatcctcacgcccagtttataggtctgagcgcaacc
gttgggaatccggaggaactggccaaggaactcgggttaaaactggtcctctacgacgag
aggcccgttgatctcgagaggcacgtgataatagcgagaaacgagagtgagaagtggagg
cacgtagcgaacctctgcaaagcggaggcaatgagaaagtcgaagcagggctacaaaggc
cagaccatagtcttcacgttctcaaggaagagaacccacgaactctcagcctacctcacg
agcaaaggcctcaaagcgaagccctatcactcgggtctgccctataagcagagaaaactc
acggagatggagtttctggcccagagacttgacgtcgttgttacgactgcggctctcgga
gctggagttgatttccctgcatctcaggtcatattcgagagcctcgcgatgggcaacaag
tggctcagcgttagggagttccaccagatgcttggaagggccggaaggccactctaccat
gagaagggaaaggtctacctcatagtcgagcccgggaggaagtattctgcccagatggag
ggggcggaggatgaagtggcgtttaagcttttgacggctccgatagagccggtaaccgtt
gagtggagcgatgaacttgaacaggacaacgttcttgcccattcctgcgtcttcaacagg
cttgaggtcatcgaggaagttcaggccagatgtcttggggcgaaccagagcgctgaaaaa
gttctggaaaaacttgaggagttcgggcttgtaaggctgaagaggcccttcgtcgaggta
accccctatggaagggccgtgagcatgagctttctcctgccaaaggaggccgagttcata
aggatcagcctcgggaaaaagcccgcccggtggatagcggtgaagcttctgccctttgag
aacctctatctgagcggaacacttcagagggagcttgaaggggcagtaagggggaggata
agcgccaacgtcttctcttcgagctttgcatccatacttgaggagcttgacagagttatc
cccgaactaagccccaacgcggcggagaggcttttcaccatctaccaggacttctttatg
tgcggtgaagacgactgcaccgagtacgcgatggaaaaggtgagcaacctgataatcgag
ctgagacggagcgggaagcatcccactcaaatagccgagcacttcaggaaggtctatggc
ctgatagtctatcccggcgacgtcttcacgtggctcgacggcatagtcaggaagcttgag
gcaatagagaggatagcgagggtcttcaggttcaggaatgtggaggaagaagcaaaagtc
ctgaagagggagattgaggaggccaggacgatacgcaacgggggagaaagaaaaggaagg
aagggcttcacttcctccgcaggaagagggcgggaactgcggcgagggcaacgatag

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