Thermococcus gorgonarius: A3K92_06165
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Entry
A3K92_06165 CDS
T05047
Name
(GenBank) RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
tgg
Thermococcus gorgonarius
Brite
KEGG Orthology (KO) [BR:
tgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgg03019
]
A3K92_06165
Messenger RNA biogenesis [BR:
tgg03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
A3K92_06165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
DPM3
Motif
Other DBs
NCBI-ProteinID:
ASJ01093
UniProt:
A0A2Z2M740
LinkDB
All DBs
Position
complement(1099779..1102355)
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AA seq
858 aa
AA seq
DB search
MLFVVRPGRKKNELEAFFIEKESEKLSQMQGLKADRVYRFIMREGRLFKVLEGSQYRNPK
EIEKLLRQARIVLVNADEWEDYFKRRLQNKNVEKAELCRLCLLEDKITVLTEGNRIKYRN
EYICERCAEDELKRELRFRFNSIAMFDQAKKLLERFRDLDKVLYAFDPRFDPTKHPEITK
WDELKAKHVKVERLKVDELPLPERFKEVLKGEGVNELLPVQSLAVKNGLLDGENLLVVSA
TASGKTLIGELAGIPKAMEGKKMLFLVPLVALANQKYEDFKRRYSKLGLRVAIRVGMSRI
KTKDELVVVDTDIDADIIVGTYEGIDYLLRAGRKIGNVGTVIIDEIHTLDDEERGPRLDG
LIARLRKLYPHAQFIGLSATVGNPEELAKELGLKLVLYDERPVDLERHVIIARNESEKWR
HVANLCKAEAMRKSKQGYKGQTIVFTFSRKRTHELSAYLTSKGLKAKPYHSGLPYKQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGKVYLIVEPGRKYSAQMEGAEDEVAFKLLTAPIEPVTVEWSDELEQDNVLAHSCVFNR
LEVIEEVQARCLGANQSAEKVLEKLEEFGLVRLKRPFVEVTPYGRAVSMSFLLPKEAEFI
RISLGKKPARWIAVKLLPFENLYLSGTLQRELEGAVRGRISANVFSSSFASILEELDRVI
PELSPNAAERLFTIYQDFFMCGEDDCTEYAMEKVSNLIIELRRSGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFRFRNVEEEAKVLKREIEEARTIRNGGERKGR
KGFTSSAGRGRELRRGQR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgttgtgagaccagggagaaagaagaacgagcttgaggccttcttcattgag
aaagagtccgaaaagctttcccagatgcaggggcttaaggctgacagagtttaccgcttc
ataatgcgcgagggaagactcttcaaggttcttgaggggagccaataccggaacccaaag
gagatagagaaactcctccgccaggccaggatagtgcttgtaaacgccgacgagtgggag
gactacttcaaaaggaggctccagaacaagaacgtcgagaaggccgagctgtgtcgcctc
tgcctacttgaggacaagattacggttttgacagagggcaacaggattaagtaccgcaac
gagtacatctgcgagcgctgtgccgaggacgagctcaagagagaactccgcttccgcttc
aacagcatagctatgttcgaccaggctaaaaagcttttggagaggtttagagacctcgac
aaagtcctatacgctttcgacccgcgctttgacccgacgaagcatccagagattaccaag
tgggacgagctcaaggcaaagcacgttaaggttgagaggcttaaggtcgatgagctaccc
ctccctgagaggtttaaggaagtcctgaagggggagggcgtaaacgaactccttccggtt
cagagcttggccgtgaagaacggcctccttgacggcgaaaacctgttggtggtttccgcc
actgccagcggtaagacgctcatcggcgagctcgcgggaatcccgaaggcgatggaagga
aaaaagatgctcttcctggtgccgctggtggccctcgcaaaccagaagtacgaggacttc
aagagaaggtattccaaactcggcctcagggtggccatacgcgttggcatgagcaggata
aagacgaaggatgagcttgtggttgttgataccgacattgatgcagacataatcgtcgga
acctatgagggaatagactacctgctcagagctgggagaaagataggaaacgtcggaacg
gttatcatagatgagatccacacgctggacgacgaggagcgcgggccccgtctagatggc
ctcatcgcgaggctgagaaaactctatcctcacgcccagtttataggtctgagcgcaacc
gttgggaatccggaggaactggccaaggaactcgggttaaaactggtcctctacgacgag
aggcccgttgatctcgagaggcacgtgataatagcgagaaacgagagtgagaagtggagg
cacgtagcgaacctctgcaaagcggaggcaatgagaaagtcgaagcagggctacaaaggc
cagaccatagtcttcacgttctcaaggaagagaacccacgaactctcagcctacctcacg
agcaaaggcctcaaagcgaagccctatcactcgggtctgccctataagcagagaaaactc
acggagatggagtttctggcccagagacttgacgtcgttgttacgactgcggctctcgga
gctggagttgatttccctgcatctcaggtcatattcgagagcctcgcgatgggcaacaag
tggctcagcgttagggagttccaccagatgcttggaagggccggaaggccactctaccat
gagaagggaaaggtctacctcatagtcgagcccgggaggaagtattctgcccagatggag
ggggcggaggatgaagtggcgtttaagcttttgacggctccgatagagccggtaaccgtt
gagtggagcgatgaacttgaacaggacaacgttcttgcccattcctgcgtcttcaacagg
cttgaggtcatcgaggaagttcaggccagatgtcttggggcgaaccagagcgctgaaaaa
gttctggaaaaacttgaggagttcgggcttgtaaggctgaagaggcccttcgtcgaggta
accccctatggaagggccgtgagcatgagctttctcctgccaaaggaggccgagttcata
aggatcagcctcgggaaaaagcccgcccggtggatagcggtgaagcttctgccctttgag
aacctctatctgagcggaacacttcagagggagcttgaaggggcagtaagggggaggata
agcgccaacgtcttctcttcgagctttgcatccatacttgaggagcttgacagagttatc
cccgaactaagccccaacgcggcggagaggcttttcaccatctaccaggacttctttatg
tgcggtgaagacgactgcaccgagtacgcgatggaaaaggtgagcaacctgataatcgag
ctgagacggagcgggaagcatcccactcaaatagccgagcacttcaggaaggtctatggc
ctgatagtctatcccggcgacgtcttcacgtggctcgacggcatagtcaggaagcttgag
gcaatagagaggatagcgagggtcttcaggttcaggaatgtggaggaagaagcaaaagtc
ctgaagagggagattgaggaggccaggacgatacgcaacgggggagaaagaaaaggaagg
aagggcttcacttcctccgcaggaagagggcgggaactgcggcgagggcaacgatag
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