Thermococcus gorgonarius: A3K92_07030
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Entry
A3K92_07030 CDS
T05047
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tgg
Thermococcus gorgonarius
Pathway
tgg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tgg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3K92_07030 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgg03021
]
A3K92_07030 (tfb)
Transcription machinery [BR:
tgg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3K92_07030 (tfb)
Prokaryotic type
Archaeal type
TFB
A3K92_07030 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_RRN7
Zn_ribbon_IS1595
A2L_zn_ribbon
Trm112p
RUBY_RBDX
UPF0253
FtrD-like
HARE-HTH
Auto_anti-p27
Cyclin_N
HTH_Tnp_ISL3
Zn_ribbon_tTFIIB
Lar_restr_allev
Zn_Ribbon_Prim
Sigma70_r4_2
RB_B
Ribosomal_S27e
Cas12f1-like_TNB
FYDLN_acid
Zn_ribbon_LysW
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ASJ01248
UniProt:
A0A2Z2MH02
LinkDB
All DBs
Position
complement(1264074..1264985)
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AA seq
303 aa
AA seq
DB search
MADRKVCPVCGSTEFFYDRSRGELVCANCGYVLEENIVDEGPEWRAFDPDQRAKRVRTGA
PMTLMIHDKGLSTDIDWRDRDIHGNQITGMYRSKMRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMRLPKRVKEQAAALYRKAVMKKLIRGRSIEGMVSAALYAACRMEGVPRTLDE
IARYSKVTKKEIGRSYRFMARGLGLNLRPTSPIDYVDRFGDALGVSARTKKRAKEILQEA
IRMGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVANVTEVTVRNRYKELVEKLGIK
VPM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggccgataggaaggtctgtcccgtttgcggttcaacggagtttttttatgatagaagt
aggggagagctcgtctgtgcaaactgtggctacgttcttgaggagaacatagtcgatgaa
ggacctgagtggagggctttcgatccggatcagcgggccaagcgagttaggaccggtgcg
ccgatgacgcttatgattcatgacaagggcctctccaccgacatagactggcgcgatagg
gatatacacgggaaccagataaccggtatgtaccgaagcaagatgagacgtctcagaatg
tggcagagaaggatgcgcataaacgatgccgccgagaggaaccttgcatttgcactcagc
gagctcgacagaatggctgctcagatgagacttcccaagagagtaaaggagcaggcggcc
gcgctgtaccgaaaggccgttatgaaaaagctcatccgcggccgttctattgagggaatg
gtatccgctgcactttacgctgcctgcaggatggaaggcgtgccaagaacattggacgag
atagcgcggtattcgaaggttaccaaaaaggagattggaagaagctaccgctttatggcc
cgtggacttggtttgaacctgcgtccgaccagcccaatagactacgttgaccgctttggg
gacgccctaggtgtgagtgcacggacgaagaaaagggccaaggagatacttcaggaagct
ataagaatgggcatcacgagcgggaaaggtcctaccggtcttgccgccgctgccctttac
gttgcttccctgctcgaaggtgagaaaaagacccagagggaagttgccgaagttgcgaac
gttaccgaggtaactgtcagaaatcgctacaaagagctcgttgaaaagcttggcataaag
gtgccgatgtga
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