Thermococcus gorgonarius: A3K92_07435
Help
Entry
A3K92_07435 CDS
T05047
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tgg
Thermococcus gorgonarius
Brite
KEGG Orthology (KO) [BR:
tgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgg03016
]
A3K92_07435
Enzymes [BR:
tgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A3K92_07435
Transfer RNA biogenesis [BR:
tgg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A3K92_07435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
DUF1045
HGD-D
DUF6304
Motif
Other DBs
NCBI-ProteinID:
ASJ01325
UniProt:
A0A2Z2MA01
LinkDB
All DBs
Position
1340878..1341432
Genome browser
AA seq
184 aa
AA seq
DB search
MRAFIAIDVSDEVRDNLLKAQKRIGSKAAKIKFVERENFHVTLKFLGEIDEATAKEVKKV
LAEIAKKHKKHRVRVKGIGVFPNPNYVRVIWAGIENDEGLKAIAQDVEKEMRRLGFKKEK
DFVAHITIGRVKFVKDKLELAMALKDLANEDFGEFEVSAIELKKSTLTPKGPIYETVARF
ELAE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgttcatagcgattgacgtcagcgacgaagttagggacaatctcctaaaggcc
cagaaaaggatagggagtaaagcggcaaaaataaagttcgttgagcgcgagaactttcac
gtaacgctcaagttcctcggtgagatagacgaagcaaccgctaaagaagtcaagaaggtt
ctagcggagatagctaagaagcataaaaagcaccgcgtccgcgttaagggcatcggcgtc
ttcccgaaccccaactacgtgagggtaatctgggcgggcatagaaaacgacgaggggctt
aaggcgatagctcaggatgttgagaaggagatgcgtcgcttgggcttcaagaaagagaaa
gacttcgttgcacacatcacaattggccgcgtcaagttcgtgaaggacaagcttgagctg
gcgatggcgctgaaagacctcgccaacgaggactttggtgagttcgaggttagcgcgata
gagctcaaaaagagcacgctgacgcctaaggggccgatctacgagacggtggcgaggttc
gagctggcggagtga
DBGET
integrated database retrieval system
