Tunturiibacter gelidiferens: RBB81_02265
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Entry
RBB81_02265 CDS
T10211
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi00630
Glyoxylate and dicarboxylate metabolism
tgi00680
Methane metabolism
tgi01100
Metabolic pathways
tgi01120
Microbial metabolism in diverse environments
tgi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RBB81_02265 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RBB81_02265 (fdhF)
Enzymes [BR:
tgi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RBB81_02265 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4_7
Fer4_6
Fer4
Fer4_8
Fer4_21
Fer4_2
Fer4_9
Fer4_10
Fer4_16
Fer4_18
Fer4_15
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
XCB22766
UniProt:
A0AAU7Z1K5
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Position
419427..422453
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AA seq
1008 aa
AA seq
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MATTKSLLNTPAEHTPNTQLTIDGLQVPGRSGELLIDLLNRRTAVSAQKPVPQVCYMKQM
GPIESCDTCLVKVNGELARACSTRVVAGMKVETAGETVDIAQREAFDRILENHMLYCTVC
DNNNQNCTIHNTTAVLDVKHQHREYKRKPYEKDMSNPFYRYDPDQCILCGRCVESCQNVQ
VNETLSIDWESDHPRVLWDGGTQIEGSSCVSCGHCVTVCPCNALMEKSMLGEAGYMTDLP
AATLNNMIDVVKGVEPPIGYGPILSLSEMESEMRNERTKRTKTVCTYCAVGCSFEVWTKE
RHILKIEPTHGPANGISTCVKGKFAWGHINSDDRLVKPLLRDGESFREIEWEEALDIIEH
TFKRIKNEHGPDALAFIASSKCTNEESFVMQKLARAVIGTNNVDNCARYCQNPATMGLQR
TVGYGGDSGSIADIEKAGLVLIVGANPAENHPVLCTRVKRSHKHRGQRLIVADLRKHEMA
ERADIFFRPNPSTDAVWMCAVSKYIIDSGLAKMDFVNKWVNHFDEFKKSLEPFTLEYAEK
ITGVPAATLTTVAHEIAGADGTCILFAMGVTQHCGGSDTATALSNLLLVTGNYMRPGAGA
YPLRGHNNVQGASDYGSMPNVFSGYQKVDDPEVRAKFEADWGVTLPTTTGKDNHEMVEAI
LDGTLKSLYIKGEDTITSDSNANFVGSALEKLEFLIVQDINFSETCRFADLILPAAASLE
KDGTYTSTERRIQRINKAMEPLGESKADWEIIQLIANRMGGNWNYKHPSEIMDEVARLTP
LFAGVSYTRLEGFDSLQWPVHADGTDSPLLFTEGFPFPDGRAKFYPIEYVPPSEETSSVY
DLHLNNGRLLEHFEQGSMTFRTPGIREITPNSWIEVSPELAAERGVTTGRFVQVTSPHGK
VRVQVLVSERVKGKQLYMTLNSVDEPVNRLTSSFTDRATHTPAFKETAVSMTVLPEQGEN
PLPRRNFRYGTRTPQPGLEIERKWARKDYHLPGTAASDKLVQITSNTV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctactacgaaatcgctgctgaacactcctgccgagcacactccgaatacacagttg
accattgatggactgcaggtgcctgggcgatccggtgaactgttgatcgacctgctgaat
cggcgcaccgcggtgagtgcacagaagcctgtgccgcaggtctgctacatgaagcagatg
gggcctatcgaaagctgcgacacctgtctggtgaaggtgaatggagagctggctcgggcg
tgttcgaccagagtcgtcgcgggaatgaaggtggagaccgccggggagactgtcgacatc
gcacagcgcgaggccttcgaccgcatcctcgagaatcacatgttgtactgcacggtatgc
gacaacaacaatcagaactgcacgatccacaatacgacggcggttctggatgtgaagcac
cagcaccgcgagtacaagcggaagccgtatgaaaaggacatgtcgaacccgttctaccgc
tacgatccggaccagtgcattctgtgcgggcggtgtgtggagtcgtgccagaacgtgcag
gtgaatgagacgctgtcgatcgactgggagagcgatcatccgcgggtgctgtgggatggt
gggacgcagattgaaggctcgagctgcgtctcatgtgggcactgtgtcacggtctgtccg
tgcaatgcgctgatggagaagtcgatgctgggcgaggccggctacatgaccgatctgcca
gcggcaacgttgaacaacatgatcgacgtggtgaagggtgtcgaaccgccgatcggatat
gggccgatcctgtcgctctctgagatggagtcggagatgcgcaacgaacgcaccaaacgc
accaagacagtgtgcacctactgcgcggtgggatgcagcttcgaggtgtggaccaaggaa
cgtcacattctgaagatagagccgacacatggacctgcgaatgggatctcgacctgcgtg
aagggcaagttcgcgtgggggcatatcaactccgatgatcggctggtgaagcctctgctg
cgcgatggagagagcttccgcgagatcgaatgggaggaggcgctcgacatcatcgagcac
accttcaaacgcatcaagaacgagcatggaccggatgcgctggcgtttatcgcctcatcg
aagtgcaccaatgaagagagcttcgtgatgcagaagctggctcgcgcggtgatcggcacc
aacaacgtcgacaactgcgctcgctactgccagaaccctgcaacgatgggactgcagcgc
accgttggctacggcggcgactcgggttcgattgcagatatcgaaaaagccgggctggtg
ttgatcgttggggcgaatcctgcggagaatcaccctgtgctttgcacgcgggtgaagcgc
tcgcataagcatcgcgggcagcggctgatcgtcgctgatctgcgcaagcatgagatggcc
gaacgcgcggatatcttcttccgtccgaacccttcaaccgacgcggtgtggatgtgtgcg
gtgtcgaagtacatcattgacagcggcctggcgaagatggacttcgtcaacaaatgggtg
aatcatttcgatgagttcaagaagtcgcttgaaccgttcaccctggagtatgccgagaag
attactggtgttcccgcggcgacactgacgacggtggcgcatgagattgcaggggcggat
gggacgtgcatcctgtttgcgatgggcgtgacgcagcattgtggcggatcggatacggcg
accgcgctctcgaatctgctgctggtcactggaaactacatgcggccaggggcgggcgct
tatccgctgcgcggccacaataatgtgcagggagcgagcgattacgggtcgatgccgaat
gtcttcagcggctatcagaaggtggacgatccggaggttcgtgcgaagttcgaggcagac
tggggcgtcacgctgccgaccacgacgggcaaagacaatcacgagatggttgaggcaatt
ctggatggaacgctgaagtcgctttacatcaaaggtgaggacacgatcacctctgactcg
aacgcgaactttgtcgggagcgcgctggagaagctcgagttcctgattgtgcaggacatc
aacttttcagagacttgccgttttgccgacctgatcctgccggcagcggcatcgcttgaa
aaagacgggacctacaccagcacagagcgccgcattcaacgcatcaacaaggcgatggag
ccgttgggtgagtcgaaggccgattgggagatcattcagctgattgccaatcggatgggc
ggtaactggaactacaaacatccttccgagatcatggacgaggtggcgcggctaactccg
ctgtttgccggggtgagctatacgcggctggagggcttcgatagcctgcagtggccggta
catgcggacggaaccgactcgccgctgttgtttaccgagggctttccttttcccgatggt
agggcgaagttctatccgatcgagtacgttccgccatcggaggagactagttcggtttac
gatctgcacctcaacaacggccgtttgctagagcattttgagcagggcagcatgaccttc
cgtacaccgggtattcgggagattacgccgaatagctggatcgaggtttcgccggagctg
gcggctgaacgcggagtgactactggacgcttcgtgcaggtgacctcgccgcatggcaag
gttcgtgtgcaggtgttggtgtccgagcgcgtgaagggcaagcagctctacatgacgctg
aactcagtggacgaaccggtgaaccggctgaccagcagttttaccgatcgcgcgacgcat
actcctgcattcaaagagacggccgtgagcatgacggtgttgccggagcagggcgagaat
cctctgccgcggagaaacttccgttacggcacgcgcactccacagccgggtctcgagatc
gagcgcaaatgggcacgcaaggattaccatctgcccggcaccgctgcctctgacaaactc
gttcagattacctccaataccgtctaa
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