Tunturiibacter gelidiferens: RBB81_02275
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Entry
RBB81_02275 CDS
T10211
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi00541
Biosynthesis of various nucleotide sugars
tgi01100
Metabolic pathways
tgi01250
Biosynthesis of nucleotide sugars
Module
tgi_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RBB81_02275 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tgi01005
]
RBB81_02275 (kdsA)
Enzymes [BR:
tgi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RBB81_02275 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
tgi01005
]
Lipid A
RBB81_02275 (kdsA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
XCB24644
UniProt:
A0AAU7Z714
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All DBs
Position
423022..423840
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AA seq
272 aa
AA seq
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MGSAPHQVPVGRGKLFLIAGPCVIESESHARMMADAIQRITSDLGVPYVFKASYDKANRT
SIKSFRGPGLVEGCRILRMIGENTGLPVLTDVHTAADCDAVAEAVDVLQIPAFLCRQTDL
LIAAAEATKKTGGAINVKKGQFVAPWDMRHAVEKIRESGNERVSLTERGASFGYNNLVVD
MRSLPVMRGFAPVVFDGTHSVQTPSAGNGVSGGQPEFIPVLARAAVAAGVDGVFLEVHNN
PAEAKSDGANALHLNHLKAVLEQLLAVQHAVR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ataggcagtgcaccacatcaggtcccggtaggccggggcaagctttttctcattgcagga
ccgtgtgtgatcgagtccgagagccatgcacgcatgatggcagatgcaattcaacgcatc
acctcagacctcggcgttccttacgtcttcaaggccagctacgataaggccaatcgaacc
tctatcaagagctttcgcgggccggggctggtggagggttgccgcattcttcgcatgatc
ggggagaatacgggcctgcctgtgttgaccgatgtgcacaccgccgcagattgcgacgct
gttgccgaagcagtggatgtgctgcagattccggcgtttctctgtcgccagacggatctg
ctgatcgcggcagccgaggcaacgaagaagaccggtggcgcgatcaacgtgaagaagggc
cagtttgtcgcgccctgggacatgcggcacgccgtcgaaaagattcgcgagagcggaaac
gagcgtgtctcgctgaccgaacgcggcgcgagcttcggatacaacaacttggtggtggat
atgcgttcgctgccggtgatgcgtgggtttgcgccggtggtcttcgatggcacccactct
gtccagacgccttcagcgggcaacggcgttagcggcgggcagccggagttcatccccgtg
ctggctcgcgcggcagtcgccgctggggtggatggtgtctttcttgaagttcataacaat
cctgctgaggcgaagtccgatggagccaatgcgcttcatctaaaccatcttaaggctgtg
ctggagcagctgctggcggtgcaacatgccgttcgctag
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