Tunturiibacter gelidiferens: RBB81_02520
Help
Entry
RBB81_02520 CDS
T10211
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tgi Tunturiibacter gelidiferens
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgi03009
]
RBB81_02520 (rlmD)
Enzymes [BR:
tgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RBB81_02520 (rlmD)
Ribosome biogenesis [BR:
tgi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RBB81_02520 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
RrnaAD
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
XCB22815
UniProt:
A0AAU7Z1L0
LinkDB
All DBs
Position
468734..470032
Genome browser
AA seq
432 aa
AA seq
DB search
MKLQIEKAIYGGAALAHQADGESIFVPFVLPGELVEVEIRQQKKNFEEASLLRVLKDSEN
RVQPTCIHFGECGGCHYQHAQYPAQVEMKVSIMQEAMERAGLKTLPEIQSHAAPPWAYRN
RMRLRLEEVGPTLRAGYNRRGTNEFLAIQECPITAPLLWRATQSLLQLATENPADRRWLS
SAAEVEFFTTADEAKMQMTILVRKDQLGLTSLCERMRQFVPELVGAGSALLKPSGPQRQI
QKPRPLESWGTQGLSYQVENEDYWVSRGSFFQINRFLIDELIRIVATNRQGLLAWDLYAG
VGLFSRALTKTFQQVVAVEAAGADLINSFKGTGRRAIESTTVEFLRNAVVQRERPQLIVM
DPPRAGVGAEVCSLLARILSPEIVYVSCDPVTLARDLKMLVDAGYKLEELHLVDLFPQTF
HLETIVVLRRQT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacaaatcgaaaaggcgatctacggcggagccgcccttgcccatcaggccgat
ggcgaatcgatctttgtacccttcgtgctaccgggcgaactggtcgaggttgagattcgt
cagcaaaaaaagaactttgaggaagcttccctactgcgggtcctgaaggattcggaaaac
cgtgtccaaccaacatgcatacacttcggagaatgcggcggatgtcactaccagcacgcc
caatatcccgcacaagtagagatgaaggtatccatcatgcaggaggcaatggaacgtgcc
gggttgaagacgctgcctgagatccagagccatgccgcgcctccctgggcgtacagaaat
cgtatgcgcttacggctcgaagaggtgggccccaccttgagagctggctataaccggcgc
ggcaccaatgagtttcttgcaattcaagagtgtcccatcaccgcgccgttgctatggcgc
gcgacccagagccttttgcaattagcgaccgagaatcctgctgatagaagatggcttagc
agtgccgcagaggtagagttctttacgaccgccgacgaagccaagatgcagatgaccatc
ctggttcggaaggatcagctcggcctgacctccttatgcgagcgcatgagacagttcgtg
ccagaactggtcggggctggcagcgctcttctcaaaccctctggcccacagcgacaaata
cagaagccgcgtcccctggagagttggggaacacagggcctgagttatcaggtagaaaac
gaagactactgggtgagccgcggcagtttcttccagatcaaccgctttctcatcgatgaa
cttattagaattgtcgcaacgaatcgccaagggttactggcgtgggatctgtatgccgga
gtgggattgttttctcgagcactgacgaaaacattccagcaagtcgtagcagtcgaggca
gccggtgccgatctgatcaactccttcaaaggaacaggcagacgcgccatcgagtcaacc
acagttgaatttctccggaacgcagtggtgcagcgggaacgccctcaattgatcgtcatg
gaccctccacgggccggcgttggggctgaggtttgctcgctcctggcgcggattttgtcc
cccgagatcgtctacgtctcctgcgatcctgtgactctggctcgcgacctgaagatgctg
gtcgacgcgggctacaagctcgaagaattgcacttggttgacctgtttcctcagacgttt
catctggagacgatcgtggttttgcgcagacaaacttag
DBGET
integrated database retrieval system
