Tunturiibacter gelidiferens: RBB81_02850
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Entry
RBB81_02850 CDS
T10211
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi00061
Fatty acid biosynthesis
tgi00071
Fatty acid degradation
tgi01100
Metabolic pathways
tgi01212
Fatty acid metabolism
tgi02024
Quorum sensing
tgi04146
Peroxisome
Module
tgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RBB81_02850
00071 Fatty acid degradation
RBB81_02850
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RBB81_02850
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBB81_02850
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tgi01004
]
RBB81_02850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgi04147
]
RBB81_02850
Enzymes [BR:
tgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RBB81_02850
Lipid biosynthesis proteins [BR:
tgi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RBB81_02850
Exosome [BR:
tgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
RBB81_02850
Exosomal proteins of breast cancer cells
RBB81_02850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XCB22878
UniProt:
A0AAU7Z2Z0
LinkDB
All DBs
Position
complement(563736..566456)
Genome browser
AA seq
906 aa
AA seq
DB search
MPTRPHLAVLLDDFRRFGHQTAIVQYTGNRRKATSYQEIATLAERFSALLAARNLQVGDR
LILWAQNSAEWVAAFYGCILRGIIAVPLDAYGTPDFAARVASDVRPSLIVGDATLLQTLP
NDWPRLSFEDWPTTLPPTVTADQAIPTLSHDTPLQILFTSGTTGEPKGIVHTHGNILASF
EPIRNAAQPYMRYERIVHPLRFLHTLPLSHVFGQMMGLWVPSIFAAEVHFESRLTAPRLI
ETIRRERISVLAGVPRVLALLKTNLETEHPNLTARLAAAQGISAQKRWWRFRDIHSLFGF
KFWAFVTGGGALPAPIEQFWNALGFVLVQGYGMTETSALITLNHPFKVARGTMGKPLPGR
DVKIQPDGEVLVRGPMISPATWSGGALQQRTDEWLATGDLAEAQPTGELRFLGRKSETIV
TATGVNLHPEDLEAAFEQEHEVAACAVVPIEGPTGPEPCAVLALRTTPDHAPAILQRANT
RLAEFQRIRRWAIWPEPDLPRTSTGKIKRAAVAQWLASREANNGSAATSPSALPSTDWLL
TLITQITGESLPAEQPSQDPEAKDQDLRLAEDLRLDSLGRVQLQDALEQRFGTPLPQDQF
DHTETLNQLRQLLIHSGNESLEPIQPLPSNDTPSSEISNSTTPPHRSETTPPPEPRTSPA
ATHYLYPHWPWSLPIRWIRSAFIEFVAQPLVWFLAAPRVSPTTPHPATTPQSPAPQPAEP
LLIIANHVTAYDLSLLFYALPRAIRLHTAVAMSGEMLEDFRHARNQHPRWLNPLGPPTWL
LLTALFNVFPLPRLRDFQRSFAHAGNALDHGFHVVVFPEGTRSPDGTLAPFRPGIGLLVK
QSSAAVLPMAIQGLGELKTRKRRWFRSGALQVRTGQPIRFAPDDSEAAITARLHAEVETL
LAKNQP
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgcccccacctggccgtactccttgacgacttccgtcgcttcggccaccag
acagccatcgtccagtacaccggcaaccgccgcaaagccaccagctaccaggaaatcgcc
accttggccgaacgcttctccgcacttctggccgcgcgcaacctccaggtcggcgaccgc
ctcatcctctgggcgcagaacagcgccgaatgggtcgccgccttctacggctgcatcctt
cgcggcatcatcgccgtccccctcgacgcctacggcacccccgacttcgccgctagagta
gcctccgacgtccgcccctccctcatcgtcggcgacgccaccctcctccaaaccctcccc
aacgactggccacgtctctccttcgaagactggcccaccaccctcccccccacagtaacg
gcagatcaagccatccccaccctctcccacgacacacccctccagatcctcttcacctcc
ggcaccaccggcgagcccaaaggcatcgtccacacccacggcaacatcctcgccagtttc
gagcccatccgcaacgccgcccaaccctacatgcgctacgagcgcatcgtccaccctctc
cgcttcctccacaccctccccctcagccacgtcttcggccagatgatgggcctctgggtc
ccctccatcttcgccgccgaggtccacttcgaatcccgcctcaccgccccgcgcctcatc
gaaaccatccgccgcgaacgcatctccgtcctcgccggagttccccgtgtcctcgccctg
ctcaagaccaacctcgaaaccgaacacccaaacctcaccgcacgcctcgcagccgcccaa
ggcatctccgcacaaaagcgctggtggcgcttccgcgacatccactccctcttcggcttc
aagttctgggccttcgtcaccggcggaggcgccctccccgcacccatcgagcagttctgg
aacgccctcggcttcgtcctcgtccagggctatggcatgaccgaaacctccgccctcatc
accctcaaccatcccttcaaggtagcccgcggcaccatgggcaagcccctccccggccgc
gacgtcaagatccaacccgacggcgaggtcctcgtccgcggccccatgatctcccccgcc
acctggtccggaggcgccctccagcaacgcaccgacgagtggctcgccaccggcgatctc
gctgaagcccagcccaccggcgaactccgcttcctcggccgcaaaagcgaaaccatcgtc
accgccaccggcgtcaacctccaccccgaagacctcgaagccgccttcgagcaggagcac
gaagtagccgcctgcgccgtcgtccccatcgaaggccccacgggccccgaaccctgcgcc
gtcctcgccctgcgcactacccccgaccacgcccccgccatcctccaacgcgccaacacc
cgcctggccgagtttcaacgcatccgccgctgggccatctggccggagcccgatctcccc
cgcacctccaccggcaaaatcaaacgagccgccgtagcccaatggctggccagcagggaa
gccaacaacggaagcgcagccacatcgccatccgcactcccatccaccgactggctcctc
accctcatcacccagatcaccggcgagagcctcccggccgagcaaccatctcaagatccc
gaagccaaagatcaagacctccgcctcgccgaagaccttcgcctcgacagcctcggccgc
gtccaactccaggacgccctcgagcaacgcttcggcaccccgctcccgcaagaccaattc
gaccatacggagacgctaaaccaactacgccagctcctcattcactccggcaacgagtca
ctcgagccaatccagccactgccgtcgaacgacacaccatcctccgaaatctccaactcc
accacgccgccgcacagatccgaaaccactccaccacccgaacccagaacctcaccagcc
gccacgcactacctctatccacactggccctggtcgctccctatccgctggattcgctcc
gcattcatagagttcgtagcccaacccttagtctggtttctagccgcaccccgcgtctct
ccaactaccccgcatccagcaacaactccgcaatcacctgctccgcaaccagcagaacca
ctcctgatcatcgccaaccacgtcaccgcctacgatctctccctcctcttctacgccctc
ccacgcgccatccgcctccacaccgccgtcgctatgtccggcgagatgctcgaagacttc
cgccacgcccgcaaccagcatccccgctggctcaacccactcggcccgcccacctggctc
ctcctcacagccctcttcaacgtcttccccctcccgcgcctgcgcgacttccagcgcagc
ttcgcccacgccggcaacgccctcgaccacggcttccacgtcgtcgtcttccccgaagga
acccgctcccccgacggcacgctcgcccccttccgccccggaatcggtctgctcgtaaaa
caatcctccgcagcggttctgcccatggcgatccaaggcttaggcgaactcaaaacccgc
aaacgccgctggtttcgctccggcgccctccaggtgcgcaccggccaacccattcgcttc
gccccagacgactccgaagccgccatcactgcccgtctccacgccgaagtcgaaacgctc
ctcgcgaaaaatcaaccataa
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