Tunturiibacter gelidiferens: RBB81_07080
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Entry
RBB81_07080 CDS
T10211
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi00521
Streptomycin biosynthesis
tgi00523
Polyketide sugar unit biosynthesis
tgi00525
Acarbose and validamycin biosynthesis
tgi00541
Biosynthesis of various nucleotide sugars
tgi01100
Metabolic pathways
tgi01110
Biosynthesis of secondary metabolites
tgi01250
Biosynthesis of nucleotide sugars
Module
tgi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RBB81_07080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RBB81_07080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RBB81_07080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RBB81_07080 (rfbB)
00525 Acarbose and validamycin biosynthesis
RBB81_07080 (rfbB)
Enzymes [BR:
tgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RBB81_07080 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
GARS_N
Motif
Other DBs
NCBI-ProteinID:
XCB23679
UniProt:
A0AAU7Z4B1
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Position
1552171..1553334
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AA seq
387 aa
AA seq
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MRLAVKTEEIACSDSILVTGGAGFIGSNFVLDWLGAGHGPIVNLDKLTYAGNPENLASVE
HSPAYNFVQGDICDAELVASLLQKYRPRAVIHFAAESHVDRSIVGPEAFLRTNIDGTFTL
LQAARAYFEALATADRERFRFLHVSTDEVYGTLTPEAPAFHEETPYAPNSPYAASKAASD
HLVRAWVHTYGLPAIITNCSNNYGPYQFPEKLIPLMISNALQGKSLPVYGDGQQVRDWLY
VGDHASALRTVLERGRVGETYNIGGGNQRSNLEVVTTVCALLDELVPQSKFTPHLQLLKY
VTDRPGHDRRYAIDARKLEGELGWRAQESFETGLRKTVEWYLGNKSWVEHVTSGAYQQWM
KQNYSGRGEKVALGEGRSMTQAGEGTR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagattagcagtgaagacagaagagatcgcatgcagcgattccattctggtgaccggc
ggagccggctttatagggagcaacttcgtgctggactggttgggtgccggccatggacca
atcgtcaatctggataagttgacctacgccggcaatccggagaatctggcgtctgttgag
cacagcccggcctacaactttgtgcagggtgatatctgtgatgcggagttggtggccagc
ttgctgcaaaaataccgcccgcgagcggtgattcattttgccgcggagagccatgttgac
cgttcgatagtggggcccgaagcgtttctgcgaaccaacatcgatggcacctttaccttg
ctgcaagcggcccgcgcatacttcgaggcgttggcaactgcagatcgggagaggtttcgc
tttctgcacgtttcgaccgatgaggtgtatggcacgctgacaccggaagcgccggccttc
catgaggagacgccttatgctcccaacagtccatatgcagcgtcgaaggcagcgtcagac
catctggtgagggcgtgggtgcatacgtacggcttgccggccattatcacgaactgctcc
aataactatgggccgtatcagtttccggagaaactgattccgctgatgatttcgaatgct
ctgcagggcaagtcgctgcctgtatatggagatgggcagcaggtaagagactggctgtat
gttggagatcacgcgagtgcgttgcgcactgtcttagagcggggccgagttggcgagacc
tacaacatcggcggcggcaatcagcggagcaatctcgaagtggtaacgactgtgtgcgcg
ctgctggatgaactggtaccgcaatcaaagttcacgccgcatttgcaactgctgaaatat
gtaaccgatcgacctgggcatgatcggcggtatgccatcgatgcgcgcaagctggagggt
gagctcggctggcgagcacaggagagctttgagacggggctaaggaagacagtggagtgg
tatctgggaaacaaatcgtgggtggagcatgtgaccagtggggcgtatcaacagtggatg
aagcagaactactctgggcggggagaaaaagttgctcttggtgaaggtcgctcaatgacc
caagctggcgagggaactcgatga
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