Tunturiibacter gelidiferens: RBB81_10815
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Entry
RBB81_10815 CDS
T10211
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tgi Tunturiibacter gelidiferens
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgi03019
]
RBB81_10815
Messenger RNA biogenesis [BR:
tgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RBB81_10815
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
MbeD_MobD
COPIIcoated_ERV
Motif
Other DBs
NCBI-ProteinID:
XCB24697
UniProt:
A0AAU7Z7G6
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Position
2440447..2441427
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AA seq
326 aa
AA seq
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MKDFFIEDAARFDNATVTTYFVLTSMQVRDKKQGGQFLALKVSDKTGSLEARMWDDVTEA
IATCDEGCYVKVQGDISKYQGKFQITLKKLRLAAESEIDPKDFQPSTKFDVEQMWRELRG
YVSAFKNAELRRLVFAFLDDEQIGPAFKAAPAAKRLHHAWLGGLLEHVLTLVRVCLGTAP
FYPEVDADLLVTGAILHDIGKVRELEWKSSFSYTLEGQMIGHISIAQGMLREKVQQLAPF
PEKLRVLVEHMILSHHGKYEFGSPKLPMTPEAILLSALDDLEAKMQAMRNEFAAAVASGK
SSGEVTDWVRSMDRPLLNTQGYLKDE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttttttattgaagatgcggcgcggttcgataacgcgacagtgacgacttat
tttgttttgacgtcgatgcaggtgagagacaagaagcagggtggacagttccttgcgttg
aaggtgagtgacaagacgggctcgctcgaggcacgtatgtgggatgacgtgacggaggcg
atagcgacctgcgatgaaggttgctatgtaaaggtgcagggggatatctccaagtatcaa
gggaagtttcagatcacgttgaagaagttgcggctggcagctgaatcggagatcgatccg
aaggattttcagccttcgacgaagttcgatgtcgagcagatgtggcgggagttgcgggga
tatgtctctgctttcaagaacgcggagctgcggcggctggtgtttgcgtttcttgatgat
gagcagattgggcctgcgttcaaggcggctcctgctgcgaagaggctgcatcatgcgtgg
cttggggggctgttggagcatgtgttgacgctggtgcgcgtgtgcctggggacggctccg
ttttatccggaggtggatgcggatctgctggttacgggcgcaattttgcacgatattggg
aaggttcgtgagttggagtggaagtcaagcttcagctatacgctggagggccagatgatt
ggccatatcagcattgcgcaggggatgctgcgggagaaggtgcagcagttggcgccgttt
ccggagaagctgcgggtgctggtggagcatatgattctgagccaccatgggaagtatgag
tttggttcgccgaagctgccgatgacgccggaggctattcttttgagtgctttggacgat
cttgaggcgaagatgcaggctatgcggaatgagtttgcggcggcggtggcgagtgggaag
agcagcggcgaggtgactgattgggtgaggagtatggatcggccactgctgaatacccaa
gggtatttgaaggacgagtag
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