Tunturiibacter gelidiferens: RBB81_11290
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Entry
RBB81_11290 CDS
T10211
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tgi Tunturiibacter gelidiferens
Brite
Enzymes [BR:
tgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RBB81_11290
Transfer RNA biogenesis [BR:
tgi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RBB81_11290
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCB24481
UniProt:
A0AAU7Z7P4
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Position
2558171..2559631
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AA seq
486 aa
AA seq
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MSAHPFDLVASASAEMVREGFRTDFPDGSDAQVAAIRAAEGAKADADVRDLRGLSWSSID
NDTSRDLDQIEVAERVEGGVRVRVGVADVSASVLKDTPLDRHAAEQTQTVYTAVRNFSML
PTELSTDLTSLNEDEDRMAVVVEFVVDGQGKVQDTAIYRAQVRNTAQLAYSHVGPWLEGK
AGPDAKVAASAELQEQLRLQDEAAVALRAERVKMGALEFNRAEADPVVVDGKVESIGTAF
HNRASDLIEELMIATNETMARTLRAAKRSSIRRVVRSPERWARIVELVGRYGTVLPGNPD
SGALNAFLQAQRQSDAVHYPDLSLAIIKLMGPGEYVLAKGDEEEQQGHFGLAAQDYSHST
APNRRFVDLVTQRVVKAMLAGEAAPYTDDELEAIAKHCNERESAARKVERAMLKRVAAVA
LAGSLGKSFHGVITGANDKGTYVRVFDPPVEGKVVRGAQGLDVGDMVDVTLLHTDPQNAF
IDFAHG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcatccttttgatcttgttgcttctgcctccgctgagatggttcgcgaaggt
tttcgtaccgattttcctgacggcagcgacgcgcaggtggcggcgattcgtgcggctgag
ggagcgaaggccgatgcggatgttcgcgatctgcgtgggctgtcgtggtcttcgatcgac
aatgacacttcgcgggatctggaccagattgaggtagccgaacgcgtggaaggtggggtg
cgcgttagggtcggggttgccgatgtttcggcttcggtgctaaaggatacgccgctggat
cgtcatgcggcggagcagacacagacggtttatacggcggtgcggaatttttccatgctg
ccgacggagctttcaacggatctgacttcgttgaatgaagacgaggatcggatggcggtg
gttgttgagtttgtggtggacggtcaagggaaggtgcaggacactgccatctacagggcg
caggttcggaacacggcgcagcttgcgtacagccacgtcgggccgtggcttgaagggaaa
gcggggccggatgcgaaggtggctgcttcggcggagttgcaggagcagttgcgattgcag
gatgaggcggcggtggcgctgcgggctgagcgagtgaagatgggagcgctggagttcaac
cgggcggaggccgatccggtggttgtggatggcaaggtggagtcgattggcacggcgttt
cataaccgggcgagcgatttgattgaagagttgatgattgctacgaacgagacgatggcg
cggacgctgcgggctgcgaagcgatcttcaattcgtagggtggtgaggtcgccagagcga
tgggcgcggattgtggagcttgtggggaggtatgggacggtgttgccggggaatccagac
tcgggcgcgctgaacgcgtttctgcaggcacagaggcagtcagatgcggtgcactatccg
gatctctcgctggcgatcatcaagctgatggggccgggcgagtacgtgctggccaagggc
gatgaagaggagcaacaggggcacttcgggttggcggcgcaggattattcccactcgacg
gcgccgaaccgacgcttcgtggacctggtgacgcagcgggtggtgaaggcaatgctggcg
ggggaggctgctccttataccgacgatgagcttgaggcgattgcgaagcactgcaatgag
agggagtcggctgcgcgtaaggtggaacgggcgatgctgaagcgagtcgcagcggtggct
ctggccggtagcctggggaagagctttcatggagtgattaccggcgcgaacgataagggg
acctatgttcgggtattcgatcctccggtggagggtaaggtggtgcgaggcgcgcagggg
ctggacgtgggggacatggtagatgtgacgctgctgcatactgatccgcaaaatgcgttc
atcgacttcgcacatgggtga
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