Tunturiibacter gelidiferens: RBB81_11370
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Entry
RBB81_11370 CDS
T10211
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBB81_11370 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgi03400
]
RBB81_11370 (uvrA)
DNA repair and recombination proteins [BR:
tgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBB81_11370 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBB81_11370 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_21
BCA_ABC_TP_C
AAA_25
nSTAND1
AAA_23
AAA_22
DnaJ_CXXCXGXG
ATPase
nSTAND3
cobW
Viral_helicase1
NACHT
NMDAR2_C
Motif
Other DBs
NCBI-ProteinID:
XCB24497
UniProt:
A0AAU7Z6G3
LinkDB
All DBs
Position
complement(2581024..2584167)
Genome browser
AA seq
1047 aa
AA seq
DB search
MGITHITVRGARQHNLRNVDVSIPRNTLTVVTGLSGSGKSSLAFDTIYAEGQRRYVETLS
AYARQFLDQMERPDVDAIDGLSPAISIEQKTTSRSPRSTVGTITEIYDYLRLLYASVGQP
HCPNCHRPITRQSAEQIVERIAALSPGERITVYAPIVRGRKGEFREELEALDQQGFRARI
DGEMTELTEGMRLEKRKNHTIEAVVDRIILKPLPPDNTNAALAAASKESATPKYDTRRLE
TSVTKALQMANGLVLIGIQNPNTREQDETLYSSSMACPDCGINVPRLEPRSFSFNSNYGA
CPNCHGLGSIYDFDPAKTITDWSKPLLDGAMGPGSGSAYLLRLIKLFAEKTKINIKLPFE
DLTTEQQNLFLYGPPRAEAGRTGFHGIFEYLRSNLEDTKSEGYREYMMQYMSATICPVCK
GRRLRPESLAVTVNGASIADFTALPLERALTSARNINFVGRDRIIADRLQREIIERLEFL
NAVGLGYLALDRSAATLSGGEGQRIRLATQIGSRLRGVLYVLDEPSIGLHQRDNQRLINA
LENLRDLGNTVLVVEHDEDTIRKADYVLDLGPGAGKNGGYLIADGTPQQIMDNPASITGQ
YLAGKIEILARTQPRELTNNWVTVEDAHSHNLQNVTAHFPLGVMTVITGVSGSGKSTLVN
DILYRSLAKELYGSREEPGQHGKVIGIDQLDKVIQIDQSPIGRTPRSNPATYTGVFTAIR
DLFAMLPESRERGYKPGRFSFNVQGGRCEACQGEGQRRIEMNFLPDVYVLCEVCNGRRYN
QETLSVKFNGYSIADLLDLPIADAVPILKDIPTVNIKLQTLVDVGLGYIHLGQSATTLSG
GEAQRMKLARELSKRQTGRTLYLLDEPTTGLHFDDVRKLLEVLHRLTDLGNTVVIIEHNL
DIIRNADYILDMGPEGGEGGGRVIAHGTPEQIATVAASHTGGFLARYYTSHKSNFASRNG
TSHAGPQPRTIAAAPDAIKQPKAKFIAPEKKTGLAKASTTKPAERSPKSIKPKAAKKSTI
SNAGTRKDSGSKNKPPASKPAPSTKKA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggcattactcacatcaccgtccgcggcgctcgccagcacaatctgcgcaacgtcgac
gtcagcattccgcgcaacaccctcaccgtggtcaccggcctctccggctccggaaagtcc
tccctcgccttcgacaccatctacgccgaaggccaacgccgctacgtggaaaccttatcg
gcgtacgccagacaattcttagaccagatggagcgccccgacgtcgacgccatcgacggc
ctctcccccgccatctccatcgagcagaaaaccaccagccgcagcccccgctccaccgtc
ggcaccatcaccgagatctatgactatctgaggcttctttacgcgagcgtaggccagccc
cactgccccaactgccaccgccccatcacccgccagtccgccgagcagatcgtcgaacgc
atcgccgccctctcccccggcgaacgcatcaccgtctacgcccccatcgtccgcggccgg
aaaggcgagttccgcgaagagctcgaagccctcgaccagcaaggcttccgcgcccgcatc
gacggcgagatgaccgagctcaccgagggtatgcgtctcgaaaaacgcaagaaccacacc
atcgaagccgtcgtcgaccgcatcatcctcaagcccctcccacccgacaacaccaacgcc
gccctcgccgccgcttcgaaagaatcagcaacccccaaatacgacacccgccgcctcgaa
acctccgtcaccaaagccctccagatggccaacggcctcgtcctcatcggcatccagaac
cccaacacccgcgagcaggacgaaaccctctactcctcctcaatggcctgccccgactgc
ggcatcaacgtccctcgcctcgagccccgcagcttctccttcaactccaactacggcgcc
tgccccaactgccacggcctcggcagcatctacgacttcgaccccgccaagaccatcacc
gactggtccaagccgctcctcgacggcgccatgggccccggcagcggctccgcctacctc
ctccgcctcatcaagctcttcgccgaaaaaacaaaaatcaacattaagctccccttcgaa
gacctcaccaccgagcagcaaaacctcttcctctacggccccccgcgcgccgaagccggc
cgcacgggcttccatggcatcttcgaatacctccgctccaacctcgaagacaccaaatcc
gagggctatcgcgagtacatgatgcagtacatgtccgcgaccatctgccccgtctgcaaa
ggccgccgcctccgccccgaatcccttgccgtgacggtaaacggcgcatcgatcgccgac
ttcaccgccctacctctcgagcgcgctcttacctccgcccgcaacataaacttcgtaggc
cgcgaccgcatcatcgccgaccgcctccagcgcgagatcatcgagcgcctcgagttcctc
aacgccgtcggcctcggctacctcgccctcgaccgcagcgccgccaccctctccggcggc
gaaggccagcgcatccgcctcgccacacagatcggctcccgcctccgcggcgtcctttac
gtcctcgacgagccctccatcggcctccaccagcgcgacaaccagcgcctgatcaacgcc
ctcgaaaacctccgcgacctaggcaacacggtcctcgtcgtcgagcacgacgaagacacc
atccgcaaggctgactacgtcctcgacctcggccccggcgccggcaaaaacggaggctac
ctcatcgccgacggcacccctcagcaaatcatggacaacccggcgtccatcaccggccag
tacctcgccggcaagatcgagatccttgcccggacccaaccccgcgaactcaccaacaac
tgggtcaccgtcgaagacgcccactcccacaacctgcaaaacgtcaccgcccacttcccc
ctcggcgtcatgacggtcatcaccggcgtaagcggcagcggcaaatccaccctcgtcaac
gacatcctctaccgctccctcgccaaagaactctacggctcccgcgaagagcccggccag
cacggcaaggtcatcggcatcgatcagctagacaaagtaatccagatcgaccagtccccg
attgggcggactcctcgttcaaatcccgccacctacaccggcgtcttcaccgccatccgc
gacctcttcgccatgctccccgaatcgcgcgagcgcggctacaaacctggtcgcttctcc
ttcaacgtccagggcggacgctgcgaagcctgccagggtgaaggccagcgccgcatcgag
atgaacttcctccccgacgtctatgtcctctgcgaagtatgtaacggacgtcgttacaat
caggagaccctgtccgtcaagttcaacggctactccatcgccgacctcctcgacctcccc
atcgccgacgccgtcccaatcttaaaagacatccccaccgtcaacatcaagctgcaaacc
ctcgtcgacgtaggcctcggctacatccatctcggccagtccgccaccaccctctccggc
ggcgaagcccagcgcatgaagctcgcccgcgagctcagcaagcgccagactggccgcacc
ctctacctcctcgacgagcccaccaccggcctccacttcgacgatgtcagaaaactgctt
gaggtcctccaccggttaaccgacctaggcaacaccgtcgtcatcatcgagcacaatctc
gacatcatccgcaacgccgactacatcctcgacatgggtcccgagggcggcgaaggcggc
ggccgcgtcatcgcccacggcacgcccgagcagatcgccaccgtcgccgcctcccacacc
ggaggcttcctcgcccgctactacacctcccacaaatccaacttcgccagccgcaacggc
accagccacgccggcccccagccccgaaccatcgccgccgcccccgacgcgatcaaacag
ccaaaagccaaattcatcgcaccagagaagaaaaccggtctcgccaaagccagcaccacc
aaacccgccgaaagatcccccaaaagcatcaagccaaaagccgcaaagaagtccacaata
agcaatgcagggactcgaaaagattcaggatcgaagaacaaaccacccgcctcaaagccg
gccccaagcacgaaaaaagcatga
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