KEGG   Tunturiibacter gelidiferens: RBB81_11370
Entry
RBB81_11370       CDS       T10211                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
tgi  Tunturiibacter gelidiferens
Pathway
tgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RBB81_11370 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgi03400]
    RBB81_11370 (uvrA)
DNA repair and recombination proteins [BR:tgi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RBB81_11370 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RBB81_11370 (uvrA)
SSDB
Motif
Pfam: UvrA_inter ABC_tran UvrA_DNA-bind SMC_N AAA_29 AAA_16 RsgA_GTPase AAA_21 BCA_ABC_TP_C AAA_25 nSTAND1 AAA_23 AAA_22 DnaJ_CXXCXGXG ATPase nSTAND3 cobW Viral_helicase1 NACHT NMDAR2_C
Other DBs
NCBI-ProteinID: XCB24497
UniProt: A0AAU7Z6G3
LinkDB
Position
complement(2581024..2584167)
AA seq 1047 aa
MGITHITVRGARQHNLRNVDVSIPRNTLTVVTGLSGSGKSSLAFDTIYAEGQRRYVETLS
AYARQFLDQMERPDVDAIDGLSPAISIEQKTTSRSPRSTVGTITEIYDYLRLLYASVGQP
HCPNCHRPITRQSAEQIVERIAALSPGERITVYAPIVRGRKGEFREELEALDQQGFRARI
DGEMTELTEGMRLEKRKNHTIEAVVDRIILKPLPPDNTNAALAAASKESATPKYDTRRLE
TSVTKALQMANGLVLIGIQNPNTREQDETLYSSSMACPDCGINVPRLEPRSFSFNSNYGA
CPNCHGLGSIYDFDPAKTITDWSKPLLDGAMGPGSGSAYLLRLIKLFAEKTKINIKLPFE
DLTTEQQNLFLYGPPRAEAGRTGFHGIFEYLRSNLEDTKSEGYREYMMQYMSATICPVCK
GRRLRPESLAVTVNGASIADFTALPLERALTSARNINFVGRDRIIADRLQREIIERLEFL
NAVGLGYLALDRSAATLSGGEGQRIRLATQIGSRLRGVLYVLDEPSIGLHQRDNQRLINA
LENLRDLGNTVLVVEHDEDTIRKADYVLDLGPGAGKNGGYLIADGTPQQIMDNPASITGQ
YLAGKIEILARTQPRELTNNWVTVEDAHSHNLQNVTAHFPLGVMTVITGVSGSGKSTLVN
DILYRSLAKELYGSREEPGQHGKVIGIDQLDKVIQIDQSPIGRTPRSNPATYTGVFTAIR
DLFAMLPESRERGYKPGRFSFNVQGGRCEACQGEGQRRIEMNFLPDVYVLCEVCNGRRYN
QETLSVKFNGYSIADLLDLPIADAVPILKDIPTVNIKLQTLVDVGLGYIHLGQSATTLSG
GEAQRMKLARELSKRQTGRTLYLLDEPTTGLHFDDVRKLLEVLHRLTDLGNTVVIIEHNL
DIIRNADYILDMGPEGGEGGGRVIAHGTPEQIATVAASHTGGFLARYYTSHKSNFASRNG
TSHAGPQPRTIAAAPDAIKQPKAKFIAPEKKTGLAKASTTKPAERSPKSIKPKAAKKSTI
SNAGTRKDSGSKNKPPASKPAPSTKKA
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgggcattactcacatcaccgtccgcggcgctcgccagcacaatctgcgcaacgtcgac
gtcagcattccgcgcaacaccctcaccgtggtcaccggcctctccggctccggaaagtcc
tccctcgccttcgacaccatctacgccgaaggccaacgccgctacgtggaaaccttatcg
gcgtacgccagacaattcttagaccagatggagcgccccgacgtcgacgccatcgacggc
ctctcccccgccatctccatcgagcagaaaaccaccagccgcagcccccgctccaccgtc
ggcaccatcaccgagatctatgactatctgaggcttctttacgcgagcgtaggccagccc
cactgccccaactgccaccgccccatcacccgccagtccgccgagcagatcgtcgaacgc
atcgccgccctctcccccggcgaacgcatcaccgtctacgcccccatcgtccgcggccgg
aaaggcgagttccgcgaagagctcgaagccctcgaccagcaaggcttccgcgcccgcatc
gacggcgagatgaccgagctcaccgagggtatgcgtctcgaaaaacgcaagaaccacacc
atcgaagccgtcgtcgaccgcatcatcctcaagcccctcccacccgacaacaccaacgcc
gccctcgccgccgcttcgaaagaatcagcaacccccaaatacgacacccgccgcctcgaa
acctccgtcaccaaagccctccagatggccaacggcctcgtcctcatcggcatccagaac
cccaacacccgcgagcaggacgaaaccctctactcctcctcaatggcctgccccgactgc
ggcatcaacgtccctcgcctcgagccccgcagcttctccttcaactccaactacggcgcc
tgccccaactgccacggcctcggcagcatctacgacttcgaccccgccaagaccatcacc
gactggtccaagccgctcctcgacggcgccatgggccccggcagcggctccgcctacctc
ctccgcctcatcaagctcttcgccgaaaaaacaaaaatcaacattaagctccccttcgaa
gacctcaccaccgagcagcaaaacctcttcctctacggccccccgcgcgccgaagccggc
cgcacgggcttccatggcatcttcgaatacctccgctccaacctcgaagacaccaaatcc
gagggctatcgcgagtacatgatgcagtacatgtccgcgaccatctgccccgtctgcaaa
ggccgccgcctccgccccgaatcccttgccgtgacggtaaacggcgcatcgatcgccgac
ttcaccgccctacctctcgagcgcgctcttacctccgcccgcaacataaacttcgtaggc
cgcgaccgcatcatcgccgaccgcctccagcgcgagatcatcgagcgcctcgagttcctc
aacgccgtcggcctcggctacctcgccctcgaccgcagcgccgccaccctctccggcggc
gaaggccagcgcatccgcctcgccacacagatcggctcccgcctccgcggcgtcctttac
gtcctcgacgagccctccatcggcctccaccagcgcgacaaccagcgcctgatcaacgcc
ctcgaaaacctccgcgacctaggcaacacggtcctcgtcgtcgagcacgacgaagacacc
atccgcaaggctgactacgtcctcgacctcggccccggcgccggcaaaaacggaggctac
ctcatcgccgacggcacccctcagcaaatcatggacaacccggcgtccatcaccggccag
tacctcgccggcaagatcgagatccttgcccggacccaaccccgcgaactcaccaacaac
tgggtcaccgtcgaagacgcccactcccacaacctgcaaaacgtcaccgcccacttcccc
ctcggcgtcatgacggtcatcaccggcgtaagcggcagcggcaaatccaccctcgtcaac
gacatcctctaccgctccctcgccaaagaactctacggctcccgcgaagagcccggccag
cacggcaaggtcatcggcatcgatcagctagacaaagtaatccagatcgaccagtccccg
attgggcggactcctcgttcaaatcccgccacctacaccggcgtcttcaccgccatccgc
gacctcttcgccatgctccccgaatcgcgcgagcgcggctacaaacctggtcgcttctcc
ttcaacgtccagggcggacgctgcgaagcctgccagggtgaaggccagcgccgcatcgag
atgaacttcctccccgacgtctatgtcctctgcgaagtatgtaacggacgtcgttacaat
caggagaccctgtccgtcaagttcaacggctactccatcgccgacctcctcgacctcccc
atcgccgacgccgtcccaatcttaaaagacatccccaccgtcaacatcaagctgcaaacc
ctcgtcgacgtaggcctcggctacatccatctcggccagtccgccaccaccctctccggc
ggcgaagcccagcgcatgaagctcgcccgcgagctcagcaagcgccagactggccgcacc
ctctacctcctcgacgagcccaccaccggcctccacttcgacgatgtcagaaaactgctt
gaggtcctccaccggttaaccgacctaggcaacaccgtcgtcatcatcgagcacaatctc
gacatcatccgcaacgccgactacatcctcgacatgggtcccgagggcggcgaaggcggc
ggccgcgtcatcgcccacggcacgcccgagcagatcgccaccgtcgccgcctcccacacc
ggaggcttcctcgcccgctactacacctcccacaaatccaacttcgccagccgcaacggc
accagccacgccggcccccagccccgaaccatcgccgccgcccccgacgcgatcaaacag
ccaaaagccaaattcatcgcaccagagaagaaaaccggtctcgccaaagccagcaccacc
aaacccgccgaaagatcccccaaaagcatcaagccaaaagccgcaaagaagtccacaata
agcaatgcagggactcgaaaagattcaggatcgaagaacaaaccacccgcctcaaagccg
gccccaagcacgaaaaaagcatga

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