Tunturiibacter gelidiferens: RBB81_13795
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Entry
RBB81_13795 CDS
T10211
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
tgi Tunturiibacter gelidiferens
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgi03032
]
RBB81_13795
03036 Chromosome and associated proteins [BR:
tgi03036
]
RBB81_13795
03400 DNA repair and recombination proteins [BR:
tgi03400
]
RBB81_13795
DNA replication proteins [BR:
tgi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBB81_13795
Chromosome and associated proteins [BR:
tgi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RBB81_13795
DNA repair and recombination proteins [BR:
tgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RBB81_13795
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XCB20661
UniProt:
A0AAU7YVS2
LinkDB
All DBs
Position
complement(3127103..3127462)
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AA seq
119 aa
AA seq
DB search
MTKADLVDKVTALGDLTRRDGEVIVDTLFDAVIGALKTGDKIEIRGFGSFRTRQRNARTG
RNPKTGAKVDVPAKRVPFFKPSKELRDSVNPNGAAKSRPTASKKAVDKEHIDPHHPPAM
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagccgaccttgttgataaagtgaccgctcttggagacctgacccgccgtgac
ggggaagttatcgtcgataccctcttcgacgctgtcatcggagctttgaaaaccggtgac
aagatcgagattcgcggattcggaagtttccggacccgacaacgtaatgcccgaaccggc
cgaaacccgaagactggggccaaggtcgatgttccggctaagcgagttcccttcttcaag
ccatcgaaggagctgcgtgactcggtgaacccaaatggggcggcgaagtccagacccaca
gcctccaaaaaggcagtcgacaaggaacacatcgatccacatcatccgccagcgatgtaa
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