Tunturiibacter gelidiferens: RBB81_15275
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Entry
RBB81_15275 CDS
T10211
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
tgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBB81_15275 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBB81_15275 (uvrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCB20941
UniProt:
A0AAU7YXK7
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Position
complement(3503132..3506200)
Genome browser
AA seq
1022 aa
AA seq
DB search
MNDQITIRGARTHNLKGIDVDIPHNALTVVSGVSGSGKSSLAFDTVYAEGQRRYVESLSA
YARQFLERIEKPDVDHMDGLAPAIAIKQKNQTRNPRSTVATATEIYDYLRLLYARCGTVT
CLHCGGIVKHDTVDEIVTTLFALPEGTRTYVLFPIVRAEVKLEPMQIATPEPEAEVPKSK
KTATKKSSKNTKSAAPETLTLTDSLKERLTELRRRGYNRLYQSGKIVEFSTPESLLELDF
TQPIFALIDRLSISPDSRARIVDAIETGYRESGEVQFHTVPSPEAVISTEPRAESRGSGE
TPAFSLSTSPNLRFSAAFECTTCHRAYREPEPRLFSFNNPYGACPRCQGFGNTIDFDPNL
IIPDKSKTLDEGAIAPWTTTKYRPHHGEMKRAAKAAGIPTDVPWYDLTPAQQAFIEDGNS
TFPGIRGFFAALERKKYKLHVRVFLSKYRGYALCPDCRGQRLRAEARAVLIAPQNGPAQN
ICETSALTITGAQQFFDNLQLTPAQLEVAGKILEEVRQRVHFLHQVGLDYLTLDRLSSTL
SGGEAQRIQLATSLGSRLVGALYVLDEPSIGLHTRDTAKLISIMKDLRDLGNTILVVEHD
PDVIRAADHLLDLGPGAGELGGHLLAAGTVAEVTADPNSITGKYLSGRLTIPIPKHRREP
GREHLKLTGARIHNLRGVDIDIPLGLLCCVTGVSGSGKSTIVHQVLYRALMQALGQTEGA
DPAHLYRELSGTQHLNDVILVDQSPIGRTPRSNPVTYIKAFDDIRGLFSAQPDAKRKGFG
PGHFSFNVPGGRCDVCEGDGTVTVEMQFLADIELPCEECNGTRYKSSILDIRYKGKNIHD
VLNMTVKEALVYFAGHPKIVDKLYVLDEVGLGYVRLGQSATTLSGGEAQRVKLASHLATA
RSITNRSVNDTAAKARSRTLYILDEPTTGLHFDDVAKLLAAFRKLIEGGGSLLVIEHNLD
VIKSADWVIDMGPEGGSGGGQIVAVGTPEEIAANPASHTGHWLARVLNLAAPKAEPELQT
TA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccagatcacaatccgcggcgcacgaacccacaacctcaagggcatcgacgtc
gacattccgcacaacgccctcaccgtcgtcagcggcgtcagcggctccggcaaatcctcc
ctcgccttcgacaccgtctacgccgaaggccagcgccgctacgtcgaatcgctctctgcc
tacgctcgccagttcctcgagcggatcgaaaaacccgacgtcgaccacatggacggcctc
gcccccgccatcgccatcaagcaaaaaaaccagacccgcaacccacgctccaccgtcgcc
accgcaacggaaatctacgactacctccgactcctctacgcccgctgcggcaccgtcacc
tgcctccactgcggcggcatcgtcaaacacgacaccgtagacgaaatcgtcaccaccctc
ttcgctctccccgaaggcacccgcacctacgtcctcttccccatcgtccgcgccgaggtc
aaactcgagcccatgcagattgcaaccccggagccagaagccgaagtccccaaatcaaag
aagaccgcaacaaaaaaatcttcaaaaaacacaaaatccgcagcacccgagaccctcact
ctcaccgacagcctcaaagagcgcctcaccgaactccgtcgccgcggctacaaccgcctc
taccagtccggcaaaatagtagagttctccacccccgaatccctcctcgaactcgacttc
acccaacccatcttcgctctcatcgatcgcctctccatcagccccgacagtcgcgcccgc
atcgtagacgccatcgagaccggctaccgcgaatccggcgaagtccagttccacaccgtt
ccttcccctgaagccgtcatctcgaccgaaccccgagcggagtcgagggggagtggagag
acccccgcattttcgctgagcacctcacccaacctccgtttctccgccgcgttcgaatgc
accacctgccaccgcgcctatcgcgagcccgagccgcgcctcttctccttcaacaatccc
tacggcgcctgcccccgctgccagggcttcggcaacaccatcgacttcgaccccaacctc
atcatccccgacaaatccaagaccctcgacgaaggcgccatcgccccctggaccaccacc
aaatatcgcccgcaccacggcgagatgaagcgcgctgccaaagccgccggcatccccacc
gacgtcccctggtacgacctcactcccgcacagcaagccttcatcgaagacggcaacagc
accttccccgggattcgcggcttcttcgccgcgctcgaacgcaaaaaatacaagctccac
gtccgcgtcttcctctccaaatatcgcggctacgccctctgccccgactgccgcggccaa
cgcctccgcgccgaagctcgcgccgtcctcatcgcgcctcaaaatggtccagcccagaac
atctgcgagacctccgccctcaccatcaccggcgcccagcagttcttcgataatttgcaa
ctcacaccggcacaattagaagttgccggcaagatcctcgaagaggtccggcagcgcgtt
cacttcctccatcaggtcggcctcgactacctcaccctcgaccgcctaagctccaccctc
tccggcggcgaagcacagcgcattcaactcgcaacctcgctaggctcccgcctagtcgga
gccctctacgtcctcgacgagcccagcatcggcctccacacccgagacactgccaagctc
atcagcatcatgaaagaccttcgcgacctcggcaacaccatcctcgtcgtcgagcacgac
cccgacgtcatccgtgccgccgatcaccttctcgacctcggccccggcgcaggcgaactc
ggcggccatctcctcgccgcaggcaccgtcgccgaagtcaccgctgacccgaactccatc
acaggaaagtacctctccggccgcctcaccatccccatcccgaagcaccgccgcgaaccc
ggccgcgagcacctcaagctcaccggagcccgcatccacaacctccgcggcgtcgacatc
gacatccccctcggcctgctctgctgcgtcaccggcgtcagcggctccggcaaatccacc
atcgtccatcaagtcctgtaccgcgccctcatgcaggctctcggccaaaccgaaggcgcc
gatcccgcgcatctctaccgcgaactctctggcacccaacacctcaacgacgtcatcctc
gtcgaccagtcccccatcggtcgcaccccgcgatccaatccggttacatatatcaaagcc
ttcgacgacatccgcggcctcttcagtgcgcagcccgacgccaagcgcaaaggtttcggc
ccgggccacttctccttcaacgtccccggcggccgctgcgacgtctgcgaaggcgacggc
accgtcaccgtcgagatgcagttccttgccgatattgaactcccctgcgaagaatgcaac
ggaactcgttacaaatccagcatcctcgacatccgctacaaaggcaaaaacatccacgac
gttctcaacatgaccgtcaaagaagctcttgtttactttgcaggccatccaaagatcgtc
gacaagctctacgtcctcgacgaagtcggtctcgggtacgtccgtctcggccagtccgcc
accacgctctcaggcggcgaagcccagcgcgtcaagctagcctcgcacctcgccaccgct
cgctccatcaccaatcgcagcgtcaacgacaccgccgccaaagcacgcagccgcaccctc
tacatcctcgacgagccaaccaccggcctccacttcgacgacgtagccaaactcctcgcc
gccttccgaaaactcatcgaaggcggaggctccctcctcgtcatcgagcacaacctcgac
gtcatcaaatccgccgactgggtcatcgacatgggccccgagggcggcagcggaggcggc
cagatcgtcgccgtaggcacccccgaagagatcgccgccaaccccgcctcccacaccggc
cactggctcgcccgcgtcctcaacctcgccgccccgaaagccgaaccagaactccagacc
accgcgtag
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