Tunturiibacter gelidiferens: RBB81_16240
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Entry
RBB81_16240 CDS
T10211
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi02020
Two-component system
tgi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBB81_16240
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBB81_16240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgi03021
]
RBB81_16240
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tgi02035
]
RBB81_16240
Transcription machinery [BR:
tgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBB81_16240
Bacterial motility proteins [BR:
tgi02035
]
Flagellar system
Flagellar assembly proteins
Stator
RBB81_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0154
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
XCB21126
UniProt:
A0AAU7YX33
LinkDB
All DBs
Position
complement(3754839..3755777)
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AA seq
312 aa
AA seq
DB search
MNTGSSIPVQVGQKLPKGKLTGEQWTSLEAARFDEVTGIAEAGIFTPFTGEGLAASGDGS
ATERDLLLMEHLPTVRYLARRIHERLPQHVELDDLVSAGVVGLIDAFSKFDHKKKVQFKS
YAQFRIRGAILDSLRTLDWSPRELRRKGRAVEEAIRAVTQRVGRAPSEQEIAREMTLTLA
EYQALLGDLKGLEIGSLHMERSEDSGDEELAYVPGAPEDDPLFRCLKGEMKQRLADAIDE
LPEKERMVLTLYYYEELTMKEIGLTLGVVESRVSQIHSSAVVRLRASLASLRPGDSAGIV
KAKASKRKTGTR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagggagttcgattccggtacaggttgggcagaagttgccgaaggggaagctg
acgggcgagcagtggacgtcgctggaggctgcacggtttgacgaggtgacgggtattgcg
gaggcggggatattcactccgtttaccggagagggactggcagcatcaggggatggcagt
gccacggagcgggacctgcttttgatggagcatctgccgacggtgcgttacctggcacga
cgcatccacgaacgactgcctcagcatgtggagttggacgacctggtatcggccggtgtc
gttgggttgatcgatgccttctcgaagtttgatcacaagaagaaggtgcagttcaagagc
tatgcgcagttcagaattcgcggggcgattcttgattcgttgcggaccctggactggagc
ccgagggagctgcgacggaagggcagggcggtcgaagaggcgatccgtgcggtgacacag
cgggtcggacgagcgccgtcggagcaggagattgcgcgggagatgacgttgacgctggcg
gagtatcaggcgctgctgggcgatctgaaggggctcgagattggaagcctgcacatggag
cgctcggaggactccggtgacgaggaactcgcctatgttcctggtgcgcctgaggacgat
ccgctgtttcgctgcttgaagggtgagatgaagcagcggcttgcggatgcgatcgacgag
cttccggagaaggagcgcatggtgttgacgctttactactacgaagagctgacgatgaaa
gagattggactgacgttgggcgtggtggagtcgagggtctcgcagatccactcttcggcg
gtggtgagattgagggcgtcgcttgcgagtctgcggccaggggactctgctgggattgtg
aaggccaaggcttcgaagcgcaagactggaacacgttga
DBGET
integrated database retrieval system
