Tunturiibacter gelidiferens: RBB81_16390
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Entry
RBB81_16390 CDS
T10211
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBB81_16390 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgi03400
]
RBB81_16390 (uvrB)
DNA repair and recombination proteins [BR:
tgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBB81_16390 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBB81_16390 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
DUF87
SWI2_SNF2
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XCB21153
UniProt:
A0AAU7YX65
LinkDB
All DBs
Position
3783484..3785472
Genome browser
AA seq
662 aa
AA seq
DB search
MDFQLSTTYKPQGDQPRAIAELISGIHAGEKDQVLLGVTGSGKTFTMAKVIEELQRPALI
LAHNKTLAAQLYHEFKTFFPNNAVEYFVSYYDYYQPEAYIPAGDLFIEKESTINEELDKL
RLAATRSLFERRDAIIVSSVSCIYGLGSPEAYYGMLMLLEKGQKIKREDITRRLVEILYE
RNDVDFRRGTFRVRGDIIEVYPTYDENAYRIELFGDEIDSLSQIDPLFGTIRQKYSRLPI
YPKSHYVVQPERKTTAVNSIIEEMEWWEKELENQGRLVESQRIHQRTRFDLEMIKSVGFC
HGIENYSRHFSARLPGEPPPTLLDYFPQDYLLFIDESHVTVPQLHGMWHGDRSRKQNLVD
YGFRLPSAMDNRPLRFEEFESRTGQIIYVSATPGPYELTKSAGVVVEQIIRPTGLIDPQV
EIRPIKGQIDDLLAEIRDRTAKNQRVLVTTLTKRMSEDLASYYTEVGVRCRYMHSEIETL
ERIKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHVEGRAILYADKMTDSMQRAINETDRRREKQVAYNEENGITPASIIRPIEMGLAGILKA
DYADLTDEAEGMPDFSTQQELDTYIGKLESDMREAAKKFEFEKAAKLRDTVKELRTKEFL
FS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacttccagctctcgaccacctacaagccccagggcgaccagccccgcgccatcgcc
gagctcatctccggcatccacgccggagaaaaagatcaagtcctgctcggtgtcaccggc
tccggaaaaaccttcaccatggccaaggtcatcgaagagctgcaacgccccgccctcatc
ctcgctcacaacaaaaccctcgccgcccagctctatcacgagttcaaaaccttcttcccc
aacaacgctgtcgagtacttcgtctcctactacgactactaccaacccgaagcctacatc
cccgccggcgatctcttcattgagaaggagtcaaccatcaatgaagagttggataaactt
cgcctcgccgccacccgcagcctcttcgaacgccgcgacgccatcatcgtctcctcggtc
tcctgcatctacggcctcggctcgcccgaagcctactacggcatgttgatgctcctagaa
aagggccagaagattaagcgcgaagacatcacccgccgcctcgtcgaaatcctctacgag
cgcaacgacgtagacttccgccgaggcaccttccgcgtccgcggcgacatcatcgaggtc
tacccaacctatgacgaaaacgcataccgtatagagctcttcggcgacgaaatcgattca
ctctcccagatcgaccccctcttcggcaccatccggcaaaaatactcccgcctgcccatc
taccccaaatcccactacgtcgttcaacccgagcgcaagaccaccgccgtcaactccatc
atcgaagagatggagtggtgggaaaaggaattggaaaaccaaggccgcctggtcgaatcc
cagcgcatccaccagcgcacccgcttcgacctcgagatgatcaaatccgtcggcttctgc
cacggcatcgaaaactactcccgccacttctccgcccgtctccccggcgagccgccgccc
acactcctcgactacttcccccaggactatctcctcttcatcgacgagtcccacgtcacc
gtcccccaactccacggcatgtggcacggcgaccgcagccgcaaacagaacctcgtcgac
tacggcttccgtctccccagcgcaatggacaatcgccccctccgcttcgaggagttcgag
tcccgcaccggccagatcatctacgtctccgccacccccggcccctacgagctcacaaaa
tccgccggcgtagtcgtcgaacagatcatccgccccaccggcctcatcgatcctcaggtc
gaaatccgtcccatcaaaggccagatcgacgacctcctcgccgagatccgcgaccgcacc
gcaaaaaaccaacgcgtcctcgtcaccaccctcaccaagcgaatgtccgaagatctcgcc
agctactacaccgaagtcggcgtccgctgccgctacatgcactccgagatcgaaaccctc
gaacgcatcaagctcctccgcgacctccgcaaaggcgagtacgacgtcctcatcggcatc
aacctcctacgcgaaggcctcgaccttccggaggtctccctcgtcgccatcctggatgcc
gacaaagaaggctttctccgctcgcaaggctctctcatccaaaccatcggccgcgccgcg
cgccacgtcgaaggccgcgccatcctctacgccgacaagatgaccgactccatgcagcgc
gccatcaacgagaccgaccgccggcgcgaaaagcaagtcgcctacaacgaagaaaacggc
atcacccccgcaagcatcatccgcccaatagagatgggcctcgccggcatcctcaaagcc
gactacgccgacctcaccgacgaagccgaaggcatgcccgacttctccacccaacaagag
ctcgacacctacatcggcaaactagaatccgacatgcgagaagccgccaaaaaattcgaa
ttcgaaaaagccgccaagctccgcgacacagtaaaagaactccgcaccaaagagttcctc
ttcagctaa
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