Tunturiibacter gelidiferens: RBB81_16430
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Entry
RBB81_16430 CDS
T10211
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBB81_16430 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgi03019
]
RBB81_16430 (pnp)
03016 Transfer RNA biogenesis [BR:
tgi03016
]
RBB81_16430 (pnp)
Enzymes [BR:
tgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RBB81_16430 (pnp)
Messenger RNA biogenesis [BR:
tgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RBB81_16430 (pnp)
Transfer RNA biogenesis [BR:
tgi03016
]
Prokaryotic type
tRNA degradation factors
RBB81_16430 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_2
GcvP2_C
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XCB21160
UniProt:
A0AAU7YXK0
LinkDB
All DBs
Position
complement(3794585..3796999)
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AA seq
804 aa
AA seq
DB search
MKQDVTVELAGGKQIKFETGRMAKQAPGAALTSSGDNVVLATATASPDPKEGIDFFPLTV
EYREFTYAGGRIPGGFIKREGRPSEKEILTSRQIDRPIRPLFPEAFRNETQVVAFVYSAD
KENDPDVLGINGASCALALSDVPFHGPVGAVRIGLIDDQFVVNPTYAERAQSKLNIMVVG
TKDGIVMIESGAKEVAENRVVDAIEFAHEQIKKICAAIEDLVTRAGKTKRTVSEVEVDDE
YLNQLTAKVGSQLKDALDTEKHPKFESYALVKTIKDELKKDLPEGDAAAAKKLSKYYELL
REKIFRDQVLHDRIRPDHRAFDKIRDLSIEVGVLPRVHGSALFTRGETQALVSATLGTTD
DAQRLESYEGEQKRRFMLHYNFPPFSVGEVGRMSGVGRREIGHGALASRAIEAVLPAEDE
SPYTLRVVSDILESNGSSSMATVCGASLALMQAGIAIKGSVAGVAMGLVKEGENYAILTD
IAGAEDHYGDMDFKVAGTRNGITALQMDIKIMGITPQIMREALEQARKGRLFLLDTMDAV
ISGANQEKSQFAPRIHTLQIPTDKIRDLIGPGGKVIRGIIDATGVKIDVDDTGRVNVASS
DADGLARAIQMISDLTAVPEIGKTYLGKVVRLAEFGAFVEIFPGTDGLLHVSEIAEHRVK
EVKDELREGDQILVKVLAIEGNRIKLSRKAVLREQRAKLGLPEPGQIGTDGGSVAAGGQG
RQDAVVGDVAGSDDDGEDFDDDGDESTEEPNFNREEGAVPVQAGGAPGPNGPGGQRRPGG
GRRRRGGRRPGSGSGAPPSGGGNR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggatgtgacagttgagcttgccggcggcaagcaaattaaattcgagaccgga
cgcatggcgaagcaagcccccggtgcggcccttacttcaagcggcgataacgtagttctg
gcgacggcaaccgcctcacccgatccgaaagagggaatcgattttttcccgctcacagtt
gaataccgcgaatttacctatgccggcggccgtatcccgggtgggttcatcaagcgcgaa
ggccgtccgagtgaaaaggagatcttgacgagccgtcagatcgaccgccctattcgcccg
ctattccctgaggcgtttcgcaatgaaactcaggttgttgccttcgtctactccgcggat
aaagaaaatgatcccgatgtgcttggcatcaatggcgccagctgcgctttggcgttgagc
gatgttccttttcacggtccggttggtgcggtgcgaatcggtctgatcgacgatcagttt
gtcgtgaatcctacgtacgccgaacgggcgcagagcaagttgaacattatggtcgtcggt
acgaaggacggtatcgtgatgatcgagtccggtgcaaaggaagtcgcagaaaaccgtgtg
gtggatgcgattgagtttgctcatgagcagatcaagaagatttgcgcggcgattgaagac
ctcgttactcgcgcgggtaagaccaagcgcaccgtcagcgaagttgaagttgatgacgag
tatctgaatcagctgacggcaaaggttggttcgcagttgaaagatgccctcgacaccgag
aagcacccgaagttcgagagctatgcgctggtcaagacgatcaaggatgaactgaagaag
gatctccctgaaggggatgcagccgctgcaaagaagctcagcaaatactatgagcttttg
cgcgagaagatcttccgcgaccaggttttgcatgatcgaattcgtccggatcatcgggcc
ttcgataagattcgtgacctgagcatcgaggttggtgtgctcccgcgcgttcacggttcg
gccctctttacacgcggtgagacgcaggcgctggtgagtgcaacgctgggcaccacggat
gatgcgcaacgccttgagagctatgagggagagcaaaagcgccgctttatgctgcactac
aacttcccgccgttctcggttggtgaagtcggtcgtatgtctggcgtgggccggcgagag
atcggtcacggtgcgttggcttcgcgtgcgattgaggcagtgctgccggctgaggatgag
tcgccttatacgctgcgtgtcgtttcagacatcctggagtcgaatggatcgtcctcaatg
gctacggtgtgcggagcgtcgcttgcgctgatgcaggctggtattgcgatcaagggatcg
gtcgcgggcgttgcgatgggtcttgtgaaggaaggcgagaactatgccattctgaccgat
atcgccggcgcggaagatcactatggcgatatggacttcaaggtcgcgggtacgcgtaac
ggaatcacggcgctgcagatggatatcaagatcatgggcatcactccgcagatcatgcgg
gaggctctggagcaggcgcgtaagggtcggctcttcctactggatacgatggatgctgtg
atctcgggcgcgaaccaggagaagtcgcagtttgctccacgcattcacacgttgcagatt
ccaaccgataagatccgcgatttgatcggaccgggaggcaaggtgattcgcggcatcatt
gatgccacgggcgttaagatcgacgtggacgacactgggcgggtcaatgtggcgtcgagc
gatgcggatggtcttgcgcgcgcgatccagatgatcagcgatctgactgctgtgcctgag
attgggaagacctatctcgggaaggtggttcgtcttgcggagtttggggcgtttgtcgag
atcttccccggaaccgatggtcttctgcatgtctccgagattgcagagcatcgcgtgaag
gaagtgaaggatgaactccgcgaaggcgatcagattctggtgaaggttcttgcgatagaa
gggaatcggatcaaactttccagaaaagctgttttgcgtgaacagcgcgccaagcttggt
cttccggagccaggtcagattggtacggatggaggcagcgtcgcagccggtggacagggt
cgtcaagacgctgttgtcggtgatgttgccggaagcgacgatgacggtgaggacttcgac
gatgatggggacgagtcgacggaagagcccaactttaaccgcgaggagggcgctgttcct
gttcaggcgggcggagctccggggccgaatggacctggtgggcagcggcggccggggggc
ggaagacgtcgtcgcggcggtcgtcgaccgggctccgggtccggtgctcctccttcgggc
ggcggcaatcggtaa
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