Tunturiibacter gelidiferens: RBB81_16545
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Entry
RBB81_16545 CDS
T10211
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi00300
Lysine biosynthesis
tgi00470
D-Amino acid metabolism
tgi01100
Metabolic pathways
tgi01110
Biosynthesis of secondary metabolites
tgi01120
Microbial metabolism in diverse environments
tgi01230
Biosynthesis of amino acids
Module
tgi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBB81_16545 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBB81_16545 (lysA)
Enzymes [BR:
tgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RBB81_16545 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
MIase
Motif
Other DBs
NCBI-ProteinID:
XCB21183
UniProt:
A0AAU7YX89
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All DBs
Position
complement(3817862..3819163)
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AA seq
433 aa
AA seq
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MSKKIAVTPPQSEVSPRPFAYRNRLLQCDGAGLTALAAEHGTPLYVYSAQQISHRLKLFK
DAFAARPHTICYAVKANSSLAILRLLAQQGAGFDIVSGGELERVRKAHKSALKKVVFSGV
GKQIWEIDAALKADILLFNVESEAELHLLAVRAEACNKIARFALRVNPDVFAETHPYIST
GLSEHKFGIDIKAARSIYRSAKRSKWLDPAGVSVHIGSQIRKVDPFAAALTRVTSLIADL
RRDGHNIRYVDAGGGLGIDYGATASDPAKQVAKYAAALTKGLGTESAHLLLEPGRFIIAQ
AGALLTRVLYIKKNGTKTFVITDAGMNDLIRPALYHAHHEIIPVKQPAGKSTLTADVVGP
VCESGDFFARDRILPPVKPNDLILLLDAGAYGMSQTSNYNSRPRPAEVLIDGAATRLIRR
RETMRDLLAPELL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaaaaagatcgccgtaaccccacctcaatccgaggtcagtccacgcccctttgcc
taccgcaatcgcctcctccagtgcgacggagcgggcctcacagccctcgccgccgaacac
ggcacaccgctctacgtctactcggcgcaacaaatctctcaccgcctcaaactcttcaaa
gacgccttcgccgctcgcccccacaccatctgctacgccgtcaaagccaactcctccctc
gcaatcctccgtctcctcgcccagcaaggagcaggcttcgacatcgtctccggcggcgag
ctcgaacgagtccgcaaagctcacaagtccgcgttgaaaaaagtagtcttctccggtgta
ggcaaacagatatgggagatcgacgccgcactcaaagccgacatcctcctcttcaacgta
gagtccgaagccgaactccatctcctcgctgtgcgcgccgaagcctgcaacaaaatcgcc
cgcttcgccctccgcgtcaaccccgacgtcttcgccgagacccacccctacatctccacc
ggcctcagcgagcacaagttcggcatcgacatcaaagccgcccgctccatctatcgcagc
gcaaaaagatcaaagtggctcgaccccgccggtgtctccgttcacatcggctcgcagatc
cgcaaagtcgatcccttcgccgcagccctcacccgtgtcaccagcctcatcgccgacctc
cgccgcgacggccacaacattcgctacgtcgacgcaggcggaggcctcggcatagactac
ggtgccacagcatctgacccagcaaaacaagtagcgaagtacgccgccgctctcaccaag
gggctaggcacagagtccgcccatctcctcctcgagcccggccgcttcatcatcgcgcag
gcaggcgcgctcctaacccgcgtcctctatatcaaaaagaacggcaccaaaaccttcgtc
atcaccgacgccggcatgaacgacctcatccgtcccgcgctctaccacgcccatcacgaa
atcatccccgtcaaacaaccagcagggaagtcaaccctcaccgccgacgtcgtaggccca
gtctgcgagtcaggcgacttcttcgcccgcgatcgcatcctgcctccagtcaaaccgaac
gacctcatccttctcctcgacgccggagcctacggcatgtcccaaacctccaactacaac
tcccgtccccgccccgccgaggtcctcatcgacggcgccgcgacccgtctcatccgccgc
cgcgagaccatgcgcgacctcctagcccccgaactcctctaa
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