Tunturiibacter gelidiferens: RBB81_18435
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Entry
RBB81_18435 CDS
T10211
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBB81_18435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgi03000
]
RBB81_18435
Transcription factors [BR:
tgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBB81_18435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
FHA
Yop-YscD_cpl
GAF_3
GAF
AAA_5
AAA_16
GAF_2
HTH_8
AAA_2
Mg_chelatase
AAA
MCM
AAA_7
LIS_MGM1
AAA_3
CCDC14
bpMoxR
TIP49
AbiEi_4
NB-ARC
HTH_23
Motif
Other DBs
NCBI-ProteinID:
XCB21541
UniProt:
A0AAU7YZ98
LinkDB
All DBs
Position
4284303..4286162
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AA seq
619 aa
AA seq
DB search
MKPRLLAISGSLTGTVRELIDSPISVGRLEANQLCLTDPTVSRNHCTIQRVDQNGQYELV
DLDSRSGTFVNGMPILRRSLDHGDTIRIGNADFVFLTHEGEAVATPRRRASDLSSSPPSE
ATPIAPPAGLPTFGVEVGRMARDLTALFRISNVINSIRDSQLLQRELLQLIFEVVPADEG
AVVLLADFEEETLEICSWNRHTGAPSNIEVQRELVHRAFWERTAVHIDADPDAGQMNNIL
CLPLVAIERTIGVLYLTSLHPAPPFGEDHIYFLDSASRIAAVTLENILALDALRSENSKL
KRQLNPVTNLVGESRQIRQVSEFISRVAQSDSTVLIRGESGTGKEVVARSIHQSSPRSER
PFVAINCAAIPETLLESELFGHEKGAYTGALGMRKGKLEAAEDGTLFLDEIGELAPAMQA
KLLRVLQQREFERVGGTHSVAFKARVLAATNKNLEQAIKSNEFRQDLYYRLNVVSVSVPP
LREHCEDIPLLSLYFASKYAQKNKRPFKGISSEARSLLLGYSWPGNVRELENAIEHALVL
GLTEEILAEDLPNVILEQQSAKLVGAKYHDVLNESKKELILNALRDSKGSYPEAARTLGI
HPKYLHRLARNLNLKSDPP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcggctcctcgccatctcgggctcgctgaccggaaccgttcgagagctgatc
gacagtccaatctctgttggcagactcgaagcaaaccagttatgcctcaccgatcccacc
gtctcccggaaccactgcaccatccagcgtgttgaccagaacggccaatatgaactggtc
gatctcgacagcagaagcggcacctttgtcaatggaatgcccatcctgcgtcgctccctc
gaccacggagacaccatccgtatcggcaacgccgacttcgtcttcctgacgcacgaaggc
gaagcggtggccactcccagaagacgcgcgagtgacctttcttccagcccaccatcagaa
gccacgccaatcgcgccacccgcgggcctcccaaccttcggagtagaagtcggacgcatg
gcgcgagacctcaccgccctcttcagaatcagcaatgtcatcaactccatccgcgactcg
caactcctgcaacgcgagcttctgcagcttatcttcgaggtcgtcccagccgacgaaggt
gcagtcgttctgctcgctgactttgaagaagagaccctcgaaatctgcagctggaaccgt
cataccggcgcaccttcgaacatcgaagttcaaagagaactcgttcaccgcgccttctgg
gaacgaaccgccgtccacatcgacgccgatccagacgcaggccagatgaacaacatactc
tgcctgccgctggtcgctatagaacgaaccatcggcgtcctctatctcacctccctgcat
cccgctccaccctttggcgaagaccatatctacttcctcgactcggcctcccgcatcgca
gcggtgaccctcgaaaacattcttgccctcgatgcgttgcgctccgagaactcaaaactg
aaacgtcagctcaacccggtcaccaacctggtcggtgaaagtcggcagatccgtcaggtc
agcgagttcatctcccgagtcgcacagagcgactccaccgtactcattcgaggcgagagc
ggcaccggcaaagaggtcgtcgcacgctccattcaccaaagcagcccaagaagcgaacgc
cccttcgtcgccatcaactgcgccgccatccccgagacactccttgagagcgaactcttc
ggtcacgagaagggcgcatacaccggagccctcggcatgaggaagggaaagctcgaagcc
gctgaagatggaactctctttctcgacgagatcggcgaactcgctcccgcaatgcaagcc
aaactcctgcgagttctacagcaaagagagttcgaacgagtaggcggcacacactccgtc
gccttcaaagcccgcgtcctcgccgccaccaacaaaaatctcgagcaggccatcaagtcc
aacgagtttcgccaggacctctactaccgcctcaacgtagtctcggtctccgtcccgccg
ctgcgcgaacactgcgaagacatccctctgctctccctctacttcgcctcgaagtacgcg
caaaaaaacaaacggcccttcaaaggcatctcctccgaagcccgctccctcctcctcggt
tacagctggcccggcaatgtccgcgaactcgagaacgctatcgagcatgccctcgtcctc
ggcctcaccgaagagatcctcgccgaagacctccccaacgtcatcctcgagcagcagtcc
gcaaaactcgtaggggcgaagtatcacgacgtcctgaacgagtccaagaaagagctgatc
ctcaacgcgcttcgagactcaaaagggagctatcccgaagctgcacgcaccctcggcatt
caccccaagtatctccaccgcctcgcacgaaacctcaacctgaaatccgatccaccctag
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