Tunturiibacter gelidiferens: RBB81_22450
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Entry
RBB81_22450 CDS
T10211
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi00550
Peptidoglycan biosynthesis
tgi01100
Metabolic pathways
tgi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBB81_22450 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBB81_22450 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tgi01011
]
RBB81_22450 (mrdA)
Enzymes [BR:
tgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBB81_22450 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tgi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBB81_22450 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XCB22299
UniProt:
A0AAU7Z0K5
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All DBs
Position
complement(5294507..5296438)
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AA seq
643 aa
AA seq
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MQLTHHIDPNDVGPNGRAEKVSAGKLHAAQYIVALILIVLITGLWRLQVLGADNFRALAE
ANRIRKVPILAPRGRLFDREGRLLVDNYPSVSCYLLREQVKDLDADLPLISQGLHIPIEQ
IQSTLRRYQIAPKYQPIPLKQDISPDEQAFIAAHRDELPELETLDEQRRLYPRDGFAAHL
IGYVGEVSEQMLDDPRYAFYSPGDVVGRSGVEQTYDALLRGKDGSRDVIVNSHGKELGHL
GQELAVPGKDLKLTIDLDLQIAAEKALDGKNGAIVAMDPHTGEILAMVSRPTYDPNQFSV
RLTKNYWNEIINNPDHPLLNKSLQAQLAPGSTFKIIMSVAGLQENVAQTMHVSCNGGAEF
YGHFYACDKHHGAVDINNAIPYSCDTFYYTLANRLGIDTIAKYATSVGLGQRTGIDLPDE
VAGTMPSTAWKLKTQHDKWFAGETISVGIGQGAVTATPMQLARALSGIASGGVLRRPHVV
FADEVPSDMQQAIQESFPGSGDATIPLTTENWQLITDAMANVTSSPIGTAYAAHLEGVDF
AGKTGTAQVIGHDALAKTNKGHNTEPNAWFVGMAPRRNPDIVVAVLWEHGNWGNNSAKLA
SQIIDAYVNKQRKRDNNIRIATTPEPAKPATPTSEAPTVPSAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaacccaccatatcgacccgaatgacgtcggccccaacggcagggccgagaag
gtctctgcggggaagcttcatgccgctcagtacatcgtcgcgctcattctgatcgtactt
atcaccggtctgtggcggctgcaggttcttggcgctgataacttccgcgcgctcgccgaa
gccaatcgcattcgtaaggttccaatcctcgctccacgcggtcgcctgtttgaccgagag
ggccggctgctcgtcgacaactacccttcggtctcctgctatttgctgcgcgagcaggtc
aaagaccttgatgccgatctgcctctcatctcgcagggtctccacattcccatcgagcag
atccagtccacgctgcgccgctaccagatcgcgcccaaatatcagcccattccgttgaag
caggacatctcgcccgacgagcaggccttcatcgcggcccatcgcgacgaacttcccgag
ctcgagaccctggacgagcagcgccgtctctatcctcgggatggattcgccgcccacctt
atcgggtatgtcggcgaagtctctgagcagatgctcgacgacccacgctacgccttctac
tcgcccggcgacgtcgttggccgctctggcgttgaacagacctacgacgcgctgcttcgc
gggaaagacggcagccgcgacgtcatcgtcaacagccacggcaaggagcttggccacctc
ggccaggagcttgctgtcccaggcaaagacctgaagctcaccatcgacctcgacctgcag
attgccgctgaaaaagctctcgatggcaagaacggcgccatcgttgcgatggatcctcac
accggcgagatcctcgcgatggtctcgcgcccaacctacgatcccaaccagttctcggtt
cgcctcaccaaaaactactggaacgagatcatcaataatcccgatcacccgctgctgaat
aagagcctccaggcgcagctcgctccgggcagcaccttcaagatcatcatgtcagtcgcg
ggtttgcaggagaatgtagcccagaccatgcacgtaagctgcaacggtggtgcggagttc
tacggccacttctatgcctgtgacaaacaccacggtgcggtcgacatcaataatgcgatt
ccgtactcctgcgacaccttctactacacgctcgctaatcgtcttggcatcgataccatc
gcgaagtacgctacatctgtgggtctgggtcagagaacaggaatcgacctgcccgatgag
gttgccggaacgatgccctccacggcgtggaagctgaagactcagcacgacaagtggttc
gctggcgagaccatctcggtcggcatcggccagggtgcagtcaccgcgacgccgatgcag
ctcgcgcgtgcgctcagtggtatcgcgtcgggcggagttctgcgccgtccccacgttgtc
ttcgctgatgaagttccgtccgacatgcagcaggcgattcaggagtctttccccggctct
ggcgacgcgacgattcctctaaccactgagaattggcagctgatcaccgacgcgatggcc
aacgttaccagcagccctatcggcacagcctacgcagcgcatcttgaaggggtcgacttc
gcgggcaagacaggtactgcccaggtgattggccatgatgctctcgcgaagactaacaaa
ggccacaacacggaacccaacgcctggttcgtcggcatggcgccgcgacgcaatccggac
atcgttgttgccgttctctgggagcacggcaactggggcaacaactcggccaagctcgca
tcccagatcatcgacgcctacgtgaacaagcagcggaaacgcgacaacaacatccgcatc
gccaccacgcctgagcctgctaaacccgcgactcctaccagcgaagcacctaccgtaccg
agcgccgaatag
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