Thalassovita gelatinovora: HFZ77_00750
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Entry
HFZ77_00750 CDS
T06533
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tgl
Thalassovita gelatinovora
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgl03016
]
HFZ77_00750 (rnd)
Enzymes [BR:
tgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HFZ77_00750 (rnd)
Transfer RNA biogenesis [BR:
tgl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HFZ77_00750 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QIZ79106
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All DBs
Position
149064..150221
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AA seq
385 aa
AA seq
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MKTLTTTEELAHFCEQARQHEYVTVDTEFLRERTYYSKLCLVQLAMPGDTDENAVLVDPL
ATGISLEPMMDLFRDTSVVKVFHAARQDLEIFFIEHRVFPEPLFDTQVAAMVCGFGEQVG
YETLVRKIAKQSLDKTSRFTDWSRRPLTEAQSKYAVADVTHLRMIYEYLAAELHKTGRDK
WVQEELRILTDPATYIVHPEEAWKRVKTRTTSGKFLAVVRELARFREDYAQSRNVPRSRV
YKDDAMVELASTKPVTMQDLGRSRLLLRDARKGEIADGILAAVKAGIDCAPENYPKPDLS
REKLQVNPALADLLRVLLKSKTESAGVASKLIAPAADLDAIAAGLRDVPALNGWRREVFG
NDALRLCDGEIALAAKGSSVKIVKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactcaccacgaccgaagaactcgcccatttctgcgagcaggcccgccaacac
gaatacgtaacggtcgataccgaattcctgcgcgaacgaacctattattccaagctgtgc
ttggtgcaattggcgatgcccggcgataccgatgaaaatgcggttctggtcgatcctctg
gcgacggggatatcgcttgaaccgatgatggatctgtttcgcgatacatcggtggtcaag
gtgtttcatgccgcgcggcaggatctggaaatcttctttatcgaacatcgcgtgtttcct
gaaccgctattcgatacccaggtggccgcgatggtctgcggctttggcgaacaggtcggc
tatgaaacgctggtccgcaagatcgctaagcaaagtctggacaagacatcacggttcacc
gactggtcgcggcgtccgctgaccgaagcacagagcaaatacgcggtggctgatgtcacc
catctgcgaatgatctacgaatatctggcggctgagttgcacaagaccgggcgcgacaaa
tgggtgcaggaagaactgcgcatcctgaccgatccggcaacctatatcgtgcatcctgaa
gaggcgtggaaacgggtaaagacccgcacgacaagcggtaagtttttggcggtggtgcgc
gaactggcgcggttccgcgaagattatgcgcaatcgcgcaacgttccgcgcagccgggtc
tacaaggatgatgcgatggtcgaattggcgtcgaccaagccggtaacgatgcaggatctg
ggccggtcgaggcttttgttgcgggacgcccgcaagggtgaaatcgccgacggtattctg
gccgcggtcaaggctggcattgattgtgcgccggaaaactatcccaaacccgatttgagt
cgcgaaaagttgcaggtgaatccggcgcttgccgacctgctgcgggtgctgttgaaatcc
aaaaccgaaagcgctggggtagcgtcaaaactgatcgctcctgccgccgatctggatgcg
attgccgccgggctgcgcgatgtacccgcgctgaatggttggcgccgcgaagtgttcggc
aacgacgcattgcgtttatgcgatggcgaaattgcgctggcggccaagggcagttcggtc
aagatcgtcaagctgtaa
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