Thalassovita gelatinovora: HFZ77_01590
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Entry
HFZ77_01590 CDS
T06533
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tgl
Thalassovita gelatinovora
Pathway
tgl03030
DNA replication
tgl03430
Mismatch repair
tgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFZ77_01590
03430 Mismatch repair
HFZ77_01590
03440 Homologous recombination
HFZ77_01590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgl03032
]
HFZ77_01590
03400 DNA repair and recombination proteins [BR:
tgl03400
]
HFZ77_01590
Enzymes [BR:
tgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFZ77_01590
DNA replication proteins [BR:
tgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFZ77_01590
DNA repair and recombination proteins [BR:
tgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFZ77_01590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
DUF1786
Motif
Other DBs
NCBI-ProteinID:
QIZ79253
LinkDB
All DBs
Position
336476..337888
Genome browser
AA seq
470 aa
AA seq
DB search
MFLHLGLRLRIFLFFALVALGGIAAIFAGLYVGYLKALSGDLLSAFVQAGTIAAFGILGL
AAGVWLLFDEHVAKPIERLSARLRVGAHAGVSGGIDDGAARYLGDLGPAAEAVTRQLSEN
ALDSAGEIALKTEQLRQEMNRLTALLSDIPVAMVLINARHQIVLYDSQSAAVLGQVHTPR
LNASIFDYFKRAAIETAWAKLIKTGQEVAFTANGAEGEQDFELRMKPLDQGSGYMLIIDE
AHATIEPEAARPLIYDFDLLQLAEGSSADETRLSDLTFVVFDSETTGLLPHKDEIVQLGA
LRVVRGKIVQGEALDMLVNPMMPIPPGSTRVHGITDAMVVDAAPIDRAVNAFHKFAHDAV
IVAHNAPFDMAFMHRHGNRLGLSWDHPVLDTVLASAVLFGASESHTLDALCDRLGVEIPV
SQRHSAMGDARATALVLCRMLPMLEARGIATFGNLLAEMRKHGRMLKDLN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcatcttggcctgcgtcttcgtatcttccttttcttcgctctggtcgcactt
ggcggaatcgccgcgatctttgctgggctttatgtcggttatctcaaggcgctgtcgggg
gatctgttgtcggctttcgtgcaggccggaacgattgcggctttcggtattctggggttg
gcggcgggggtctggctgctgttcgacgaacatgtcgccaaaccgatcgaacgtctttcg
gcgcggctgcgcgttggggcgcatgccggggtgtccggcggcatagacgatggcgctgcg
cggtatcttggtgatctggggcctgctgccgaagcggtgacgcggcaactgtcggaaaac
gccctcgacagcgcgggtgaaatcgccctgaagacagaacaattgcgacaggaaatgaac
cggttgaccgcgcttttgtccgatatcccggtggcgatggtgctgatcaatgcccggcac
cagatcgtgctttacgattcccaatcggcagcggtgcttgggcaggtccacacgccccgc
ctgaacgcatcgattttcgattatttcaaacgcgctgccattgaaacggcatgggccaag
ctgatcaaaaccggtcaggaggtggcgtttactgccaatggcgctgagggtgaacaggat
ttcgaactgcggatgaagccgctggaccaagggtcgggctatatgctgattatcgacgaa
gcccatgcgacgatagaacccgaagccgcgcgaccgctgatttacgatttcgatctgctg
caactggcagaaggcagttcagccgatgaaacccgcttgtccgatctgactttcgtggtg
tttgacagcgaaaccacggggttgctgccgcataaggacgaaattgtgcagcttggcgcg
ctgcgcgtggtgcggggcaagatcgttcagggtgaagcgctggatatgctggtaaacccg
atgatgccgatcccgccggggtcgacaagggtgcacgggatcaccgacgcgatggtggtg
gatgcggccccgattgaccgcgcggtgaatgcatttcacaaattcgcccatgacgcggtg
atcgttgcccataacgccccgttcgacatggccttcatgcaccggcatggcaatcggctg
gggctgagttgggaccatccggtgttggatacggttctggcctcggcggtgctgttcggg
gccagtgagagccacacattggacgcgctttgtgatcggttaggggtggaaatacccgtg
tcgcagcgccacagcgcgatgggggatgcgcgtgcaacggcgttggtattgtgccgcatg
ctgccgatgctggaagcgcgtggcattgcgaccttcggaaaccttctggcagagatgcgc
aagcatggtcgaatgctgaaagacctgaattaa
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