Thalassovita gelatinovora: HFZ77_07365
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Entry
HFZ77_07365 CDS
T06533
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tgl
Thalassovita gelatinovora
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgl03032
]
HFZ77_07365 (topA)
03400 DNA repair and recombination proteins [BR:
tgl03400
]
HFZ77_07365 (topA)
Enzymes [BR:
tgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HFZ77_07365 (topA)
DNA replication proteins [BR:
tgl03032
]
Prokaryotic type
DNA Topoisomerases
HFZ77_07365 (topA)
DNA repair and recombination proteins [BR:
tgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HFZ77_07365 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIZ80303
LinkDB
All DBs
Position
1503083..1505692
Genome browser
AA seq
869 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDTEHEFDMTWEIGADSRK
HVKAIADALKDDNELILATDPDREGEAISWHLEEALRKRRAIKKDTPVSRVVFNAITKSA
VTEAMQNPRQVDNDLVHAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REMEIEAFNAREYWSVKAILATPRGQEYEARLTVLAGDKLDKYSIENETQAELAVQAINS
RDLTVQSVEAKPGSRNPSAPFMTSTLQQEASRKFGMGARQCMNAAQRLYEAGYITYMRTD
GIDMAPEAVTAARAEIETRYGKDYVPSSPRIYKNKAKNAQEAHECIRPTDMSRDPGQLAK
LETDQRRLYDLVWKRTISCQMEAARLERTTVDIGSNDGQIVMRATGQVVLFDGFLRVYEE
GRDDVVVDEDDNRLPQISQGEKADKRTISPEQHFTQPPPRYTEATLVKKMEELGIGRPST
YASVITTIQDREYVRKDKNRLFPEDKGRIVTIFLLNFFRKYVGYDFTAQLEEQLDDVSAG
ERDYKDVLARFWRDFSAAISETSELRITEVLDVLDDALAPQLYPPREDGTDPRICPKCGE
GKLHLKTSRTGGFVGCGNYPECTYTRPIAGEGADGDERLLGMDGEDEIHLKAGRFGPYVQ
RGEPTPENKKPPRASLPKGWSKDDMDLEKALTLLSLPREIGMHPEGGEIKSNFGRFGPYI
MHQLPDDAKPVYANLKDPNDVFEIGMNRAVELLAEKRANGPGRGRGAAVKPLKELGEHPD
GGAINVMEGRYGPYVKWEKVNATLPKDVDPKDVTLETAVELVNEKAAKKKPAKKAAAKKA
PAKKAATKKTTAKKPAAKKTAAKKEDPSG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgtcgtcgtagaatccccagccaaagccaaaaccatcaacaagtatctgggg
tccgattacacggttctggcatcttacgggcatgtccgcgatctaccgcccaaggatggg
tcggtcgacaccgaacatgaattcgacatgacatgggaaatcggggccgattcccgcaaa
catgtcaaagcaatcgcggacgccttgaaagacgacaacgaactgatcctcgcgaccgac
cccgaccgcgaaggtgaagccatcagctggcatctggaagaagcgctgcgcaaacgccgc
gccatcaagaaggacacgccggtatcgcgcgtggtgttcaatgcgatcaccaaatccgcc
gttaccgaagcaatgcaaaacccgcgtcaggtcgataacgatctggtccatgcctatctg
gcacgccgggcgctggattatctggtcggcttcaacctcagcccggtcttgtggcgcaaa
ctgcccggcgcgcggtctgccggtcgggtgcaatcggtctgcctgcggctgatcgttgaa
cgcgaaatggaaatcgaagcgttcaatgcccgcgaatactggtcggtcaaggcgattctg
gccaccccaaggggtcaggaatacgaagcccgcctgaccgttctggccggtgacaagctc
gacaaatacagcatcgaaaacgaaactcaggctgaattggcagttcaggcgatcaacagc
cgcgacctgaccgttcaatcggtcgaagccaaacccggcagccgcaacccgtcggccccg
ttcatgacttcgaccctgcaacaagaagccagccgcaaattcggcatgggtgcgcggcaa
tgcatgaatgccgctcaacggctctacgaagccgggtacatcacctatatgcggaccgat
ggtatcgacatggcgcccgaagcggtcaccgccgcgcgcgccgaaatcgaaacccgctat
ggcaaggactacgtgccctccagcccgcgcatttataagaacaaggccaagaacgcccag
gaagcgcatgaatgtatccgcccgacggacatgtcgcgcgatcccggccagttggccaag
ctggaaaccgatcaacgccggctttacgatctggtgtggaaacgcacgatttcgtgccag
atggaagccgcgcggctggaacgcaccaccgtcgatatcggcagcaatgacggccagatc
gtgatgcgcgccaccggtcaggtggttctgtttgacggcttcttgcgggtctatgaagaa
ggccgcgacgatgtggttgtggacgaagacgacaatcgcctgccgcagatttcccagggc
gaaaaggccgacaagcgcacgatcagcccggaacagcatttcacccagccgccgccgcgc
tataccgaagcgaccttggtcaagaagatggaagaactgggcatcggccggccgtcgacc
tatgccagcgtgatcaccacgattcaggaccgcgaatatgtccgcaaggataaaaaccgt
ctgttccccgaagacaaaggccgaatcgtcacgatcttcttgctgaatttcttccgcaaa
tatgtcggctatgatttcaccgcccagttggaagaacagcttgacgacgtgtcggcaggc
gaacgcgattacaaggatgttctggcgcggttctggcgcgatttttccgccgcgatttcc
gaaacgtccgaattgcggatcaccgaagttctggatgtgctggacgacgcgctggcccca
caactgtacccgccgcgcgaagacggcaccgacccgcgcatctgcccgaaatgcggcgaa
ggcaagctgcacctgaaaacctcgcgcaccggcggctttgtcggctgcggcaattatccc
gaatgcacctatacccggcccatcgcgggcgaaggcgcagatggcgacgaacggcttctg
ggcatggatggcgaagacgaaatccacctcaaagcaggccgattcggcccctatgtgcaa
cgcggcgaaccgaccccggaaaacaagaagccgccgcgcgcctccttgcccaaagggtgg
tccaaggatgatatggatctggaaaaggcgctgaccctgctcagcctgccgcgcgaaatc
gggatgcatcccgaaggcggggaaatcaaatccaatttcggacgcttcggcccctatatc
atgcaccaactgccggatgacgccaaaccggtctatgccaatctcaaagacccgaatgac
gtgttcgaaatcggcatgaaccgggcggtcgaactgttggctgaaaagcgcgccaacggt
ccgggacgcggtcgcggcgcggcggtaaaaccgctcaaggaactgggcgaacatcccgat
ggtggtgcgatcaacgtgatggagggccgttacgggccttacgtcaaatgggaaaaggtg
aacgccaccctgcccaaggatgtcgaccccaaggatgtgacgctggaaacggcagtcgaa
ctggtcaacgaaaaggccgccaagaaaaaaccggccaagaaggcggcggccaaaaaggcc
ccagccaagaaagccgccaccaaaaagaccacggcgaagaaaccggcggccaagaaaacc
gcagccaagaaagaagacccctcgggctag
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