Thalassovita gelatinovora: HFZ77_07555
Help
Entry
HFZ77_07555 CDS
T06533
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tgl
Thalassovita gelatinovora
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgl03016
]
HFZ77_07555 (thpR)
Enzymes [BR:
tgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HFZ77_07555 (thpR)
Transfer RNA biogenesis [BR:
tgl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HFZ77_07555 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
QIZ82502
LinkDB
All DBs
Position
complement(1538206..1538757)
Genome browser
AA seq
183 aa
AA seq
DB search
MRLFVALDLPEALREALMEVQDGLGVGREVPEENMHVTLAFLDGQSAPVVDALHDMLSAI
RMVPVRLTVKGLDLFGGRRSNLVAARVEKVPELTALQEKVAQAARMAGIDLPRRRFKPHV
TLMRFAGAMSPEARDRIAAYMAARGDHALDGGEAISFSLYQSHLREGGPVYEALATYPLI
VAG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
ctgcggctattcgtggcgctggacctgccggaggcgttgcgcgaggcgttgatggaggtg
caggacggtctgggcgtcgggcgcgaagtgcccgaagaaaacatgcatgtcacgttggcg
tttctggatggccagtcggcgccggtcgtcgatgcgttgcatgatatgttgtcggccatt
cggatggtgccggtgcggttgacggtgaaggggttggacctgtttggtggccggcggtcc
aatctggtggccgcgcgggtcgaaaaggtgccggaactgaccgcgttgcaggaaaaggtg
gcgcaggcggcgcggatggccgggatcgatttgccgcgccggcggttcaagccgcatgtg
acgctgatgcggtttgccggcgcgatgtcgccagaagcgcgggaccggatcgccgcctat
atggccgcgcggggcgatcatgcgctggacggtggcgaagcgatttcgttttcgctctat
caatcgcatctgcgcgaaggcggaccggtttacgaggcgctggcgacctatccgctgatt
gtcgcagggtga
DBGET
integrated database retrieval system
