Thalassovita gelatinovora: HFZ77_12565
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Entry
HFZ77_12565 CDS
T06533
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tgl
Thalassovita gelatinovora
Pathway
tgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFZ77_12565 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgl03019
]
HFZ77_12565 (recQ)
03400 DNA repair and recombination proteins [BR:
tgl03400
]
HFZ77_12565 (recQ)
Enzymes [BR:
tgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFZ77_12565 (recQ)
Messenger RNA biogenesis [BR:
tgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HFZ77_12565 (recQ)
DNA repair and recombination proteins [BR:
tgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HFZ77_12565 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIZ81244
LinkDB
All DBs
Position
complement(2600356..2602395)
Genome browser
AA seq
679 aa
AA seq
DB search
MPSAATLLSDVFGYDAFRPGQEEVVEAVAQGRNVLAIMPTGGGKSLCFQLPALMRDGVTV
VISPLIALMRDQVRGLREAGVEAGALTSGNTPEETDAVWQALEEKRLKLLYIAPERLGTG
SALNMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRQALNVPLAAFTATADAETQV
EIVERLFDGQAPDTFLRGFDRPNIHLAFAAKNNPRSQILSFAAARKGQSGIVYCGTRAKT
ETLAKALRDAGHSACHYHGGMQADDRRITEQRFQQEDGLIVVATVAFGMGVDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGADDIRLRRSQIDEGLAPPERRMADHTRL
NALLGLAEAQTCRRQTLLRYFGETDVTCGKCDLCDTPPEVFDGTQPVRMALSAILRTGEW
FGAGHLIEILLGTENDRIRSKGHDSLPTFGVGKDYSRQQWQAIFRQMMGHDLIRPDPERH
GALRMTEAARPILRGEDQITLRKDSITKAQRRPAVKALVSDEDAPLLSALKAKRRALAEA
ARVPAYIIFNDRTLIEMAETRPGTLDEMARIGGVGAKKLEHYGADFLSVITGAVEDMHPS
RRKLAGRDAGAIYDRLLQVQTDLARGDDGSEKPLSCSASLLAKVAQMRPDSENALARLLG
DKRADRFAAAFLDVLREAS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgctgccacgcttctgagcgatgtattcggctatgacgccttccgccccggg
caggaggaggttgtcgaggccgtggcgcaaggccgcaacgtgttggcgatcatgccaacg
ggtggcggcaaatccctttgctttcagttgcccgcactgatgcgcgacggggtgacagtg
gtcatatccccgctgatcgccctgatgcgcgatcaggtgcgcggattgcgcgaagccggg
gtcgaagccggggcgctgaccagcggcaacactcccgaagaaaccgatgcggtctggcag
gcgctggaagaaaagcggctcaagctgctttatattgcacccgaaaggttgggcacggga
tccgccctgaacatgttgcggcggatcggggttagcctgatcgcggtggacgaagcccat
tgcgtcagtcaatgggggcatgatttccgtcctgattacctgcgaattggggaattgcgg
caggcgctgaacgtaccgttggcggcattcaccgcgaccgccgatgccgaaactcaggtc
gaaatcgtggaacgtctgtttgatggacaggcaccggatacattcctgcgcggatttgac
cggccaaatatccatcttgcctttgccgccaagaacaacccgcgcagccagatccttagc
ttcgcggcggcccgaaagggacaatcgggcattgtgtattgcggcactcgggccaaaacc
gaaactcttgccaaggcgctgcgcgacgccgggcattccgcctgccattatcatggcggg
atgcaggccgatgaccgccgcatcaccgaacaaaggttccagcaggaagacgggctgatc
gtggttgccaccgttgcctttggcatgggggtggacaaacccgatatccgttgggtcgcc
catgcagacctgccgaaatcaatcgaagcctattatcaggaaatcggccgtgccggacgc
gatggtgccccggccgaaacactgaccctgtttggtgccgacgacatccgcttgcgccgg
tcgcagatcgatgaagggttggcaccaccagaacgccggatggccgatcacacccggctg
aacgctttgttgggtctggccgaggcgcaaacttgccgccgacagaccctgttgcgctat
ttcggcgaaaccgatgtgacatgcggcaaatgcgatctctgcgatacaccgcctgaggtg
ttcgacggcacccagccggtgcgtatggcgctgtcggcaatattacgcaccggggaatgg
ttcggggcgggccatctgatcgaaatcctgttgggcaccgaaaacgaccgcatccggtcc
aaggggcatgatagcctgcccacattcggggtcggcaaggattacagccggcaacaatgg
caggcaattttccggcagatgatgggccatgacctgatccgccccgatcccgaacgtcac
ggtgctttgaggatgaccgaagcggcaaggccgattttacgcggtgaagaccagatcacg
ttgcgcaaagacagcatcactaaggcgcagcgccgtccggcggtcaaggcattggtcagc
gacgaagacgcgccgctcttgtcggcgctcaaggccaaacgccgggcactggccgaagcc
gcgcgggtaccggcctatatcatcttcaacgaccggacattgatcgaaatggcggaaacc
cggcccgggacgctggatgaaatggcacggatcggcggtgtcggggcgaagaagctggaa
cattatggcgcggattttctgagcgtcatcaccggcgcggtagaggatatgcatcccagc
cgccgcaaactggctggccgcgatgctggcgcgatttatgaccgattgttgcaggttcaa
actgatcttgcgcgcggcgatgacgggtcggaaaagccgctcagctgctcagcttcgcta
ttggccaaggtggcgcagatgcgccccgacagcgaaaacgcgctcgcgcggcttttggga
gacaagcgggccgaccgttttgccgccgcctttctggacgttctgcgtgaagcaagttag
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