Thalassovita gelatinovora: HFZ77_16815
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Entry
HFZ77_16815 CDS
T06533
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
tgl
Thalassovita gelatinovora
Pathway
tgl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFZ77_16815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgl02000
]
HFZ77_16815
Transporters [BR:
tgl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HFZ77_16815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
RsgA_GTPase
AAA_29
Rop
nSTAND_NTPase5
NACHT
TOBE_2
AAA_22
AAA_28
DLIC
NB-ARC
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QIZ82019
LinkDB
All DBs
Position
3443259..3444311
Genome browser
AA seq
350 aa
AA seq
DB search
MRKSINRGQPVLTLSRVSRRYGETTALDGLDFVVPENTYMSLLGASGSGKTTLLRLIAGF
EEPDQGEISIHGERIDGQPPHLRDIGFVFQNFALFPHLTVAQNVAYGLRHRAIAPVTNEK
EITERTEESLALVGLSGFGHRAISAISGGQRQRVALARTMICEPRVILLDEPLGALDANL
RARMCDELKAIRERLKVSFLHVTGSETEALTMGDKVAVLSGGKIVQSDAPDTLFSSPSNV
DAARHLNAWNIFEAGLCGAAMGQGTIAVRFDQIDVSPKGKAPDGHPWLSAKYLTGEFNGP
TALSFFRADDGTLLQVIDHLSQPRLPDMVEGQSYDLHFAPDAARQFHGAA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatcgattaacagggggcaaccagtgctgacgctaagccgagtaagccgaaga
tatggcgaaaccactgctctggacgggctggatttcgtggttccggaaaatacctacatg
tcccttcttggggcctctggttcaggcaagacgacgctattgcgtctgattgcaggcttc
gaagaaccggatcagggtgaaatttcaatccatggcgaacgcattgacggtcaaccgccg
catctgcgcgatattggtttcgtgtttcagaatttcgcgctgtttccgcatctgacggtt
gctcagaacgtggcctatggcctgcggcaccgcgcgattgcacctgtcaccaacgaaaaa
gaaatcacggaacggaccgaagagtcgcttgcgttggttgggctttcgggcttcgggcat
cgcgcaatcagtgcgatttccggtggtcagcgccagcgtgtcgcgcttgcccgcacgatg
atctgtgagccgcgcgttattttgctcgacgaaccgctcggcgcgcttgatgcgaacctt
cgcgcccggatgtgcgacgaattgaaggccatccgcgaacggctcaaggtcagcttcctg
cacgtgaccggttccgaaaccgaagcgcttaccatgggggataaagtggccgtgctgtcg
ggcgggaagattgtccagtcggatgcgcccgacacattgttttcaagccccagcaacgtc
gacgctgcgcgccatctcaacgcgtggaacattttcgaagcgggactttgtggtgccgcg
atggggcaggggacgatcgccgtccgcttcgaccagatcgatgtcagtcccaagggcaaa
gccccggatgggcatccttggctgtcggcgaaatacctcaccggagaattcaacggtccg
accgcgctgtcgtttttccgcgccgatgacggcacgcttttgcaagtcatcgatcacctg
agccagccgcgccttcccgacatggtcgaaggccaaagctatgatcttcacttcgcgccg
gatgccgcgcgtcagttccacggagccgcctga
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