Toxoplasma gondii: 7897236
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Entry
7897236 CDS
T01093
Name
(RefSeq) eukaryotic translation initiation factor 4A, isoform 3, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Pathway
tgo03013
Nucleocytoplasmic transport
tgo03015
mRNA surveillance pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7897236
09122 Translation
03013 Nucleocytoplasmic transport
7897236
03015 mRNA surveillance pathway
7897236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
7897236
03041 Spliceosome [BR:
tgo03041
]
7897236
03009 Ribosome biogenesis [BR:
tgo03009
]
7897236
03012 Translation factors [BR:
tgo03012
]
7897236
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
7897236
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
7897236
mRNA cycle factors
Stress granule specific factors
7897236
Spliceosome [BR:
tgo03041
]
Complex C
Other components
EJC/TREX
7897236
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
90S particles
Helicases
7897236
Translation factors [BR:
tgo03012
]
Eukaryotic type
Initiation factors
eIF-4
7897236
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
StrH_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
7897236
NCBI-ProteinID:
XP_002364924
UniProt:
A0A125YSV6
LinkDB
All DBs
Position
VIIb:4475166..4479299
Genome browser
AA seq
395 aa
AA seq
DB search
MARLEPDTNFIFETSEDCQVLPTFDAMGFKEDLLRGIYAYGFERPSAVQQRAIVPIMKGR
DVIVQSQSGTGKTCVFCLGCLQCIDPKVRDPQALILSPTRELAEQSQKVCLALGDYMSVQ
VHCCIGGKRVGDDIRALEAGVHIVSGTPGRVFHMIAQRHFSTRHIKLLVLDEADEMLNRG
FKEQVYDIYRYLPPSTQVVLVSATLPHEVLEMTTKFMDDPFRVLVKRDELTLEGIKQFFV
AVEREQWKFDTLTDLYDTLTITQAVIFCNTKAKVEWLAQKMKEANFTVSRMHGDMPQQER
DEIMRQFRGGQSRVLIATDVWGRGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGV
AINFVKNDDIRILRDIEQYYATQIDEMPMNVADLI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgagactcgaaccggacacgaatttcatttttgaaacttcggaggactgtcaagtc
ctgccgacattcgacgctatgggcttcaaggaagacttgctgcgcggcatctacgcgtat
ggcttcgagcgcccgtctgctgtgcaacagcgtgcgattgtcccgatcatgaaaggtcga
gatgtaattgtacagagccagtccggaacgggtaaaacttgtgtcttctgcctcggctgt
cttcagtgcatagacccgaaagttcgcgatccgcaagctcttattctcagcccgactaga
gaacttgctgaacagtcgcagaaagtctgcttggccctaggcgactacatgtctgttcag
gttcactgctgcatcggaggcaaacgcgtgggagacgacattcgggctctggaggcaggt
gttcacatcgtgtctggaacccccgggcgggttttccacatgattgcgcaacgccacttc
agcacgcgacacatcaaactgctcgtcctcgacgaagccgatgaaatgctgaaccgcggc
ttcaaagagcaagtctacgatatttaccggtacctcccaccctccactcaagttgtcctt
gtctccgctactctcccccatgaggtgctcgaaatgacaacgaagttcatggatgacccg
ttccgcgtcctcgtaaagcgtgatgaattgacgttggaagggatcaagcagttcttcgtg
gcagttgagagagagcagtggaagttcgacacgttgacggatctctacgacactctcacc
atcacgcaggcggtcatcttttgcaacaccaaggccaaagttgagtggctggcgcagaag
atgaaagaagcgaacttcacggtcagccgcatgcatggtgacatgcctcagcaagaacgt
gacgagattatgaggcagtttcgaggaggccagagccgcgtcctcatcgccaccgacgtc
tggggtcgtggattggatgttcagcaggtgtctctcgttattaactacgacttacccaac
agtcgtgagctctacatccatcgcatcggtcgctccggtcgtttcggccgcaagggtgtt
gctatcaatttcgtgaagaacgacgatattcgtattcttcgagatatcgagcagtactac
gcaacacagatcgacgaaatgccaatgaatgtcgcagatcttatttag
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integrated database retrieval system
